JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:07 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1vyia_.name2015-04-17 17:01 0 Job name flag file
[ ]jp_ZdxYRkp.align2015-04-17 18:06 1.0KPSIBLAST alignment in FASTA format
[TXT]jp_ZdxYRkp.als2015-04-17 18:06 2.3KAlscript command file for PS/PDF output
[ ]jp_ZdxYRkp.blast.gz2015-04-17 18:06 5.2KCompressed PSIBLAST output file
[TXT]jp_ZdxYRkp.coils.csv2015-04-17 18:06 696 COILS output in CSV format
[ ]jp_ZdxYRkp.coilseq.lupas_142015-04-17 18:06 4.7KCOILS output, window length 14
[ ]jp_ZdxYRkp.coilseq.lupas_212015-04-17 18:06 4.7KCOILS output, window length 21
[ ]jp_ZdxYRkp.coilseq.lupas_282015-04-17 18:06 4.7KCOILS output, window length 28
[ ]jp_ZdxYRkp.concise2015-04-17 18:06 6.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_ZdxYRkp.concise.blc2015-04-17 18:06 2.7KBLC format prediction and alignment data
[ ]jp_ZdxYRkp.concise.fasta2015-04-17 18:06 2.2KPrediction: coiled-coil, solvent, alignment
[ ]jp_ZdxYRkp.concise.pdf2015-04-17 18:06 19KPDF prediction and alignment data
[ ]jp_ZdxYRkp.concise.ps2015-04-17 18:06 318KPrediction: coiled-coil, solvent, alignment
[ ]jp_ZdxYRkp.fasta2015-04-17 18:02 125 Input query sequence in FASTA format
[ ]jp_ZdxYRkp.full_MSA.fasta2015-04-17 18:06 8.1KFull MSA before JPred filters in FASTA
[TXT]jp_ZdxYRkp.full_MSA.fasta.noGaps.html2015-04-17 18:06 15KFull MSA before JPred filters in FASTA
[TXT]jp_ZdxYRkp.full_MSA.fasta.withGaps.html2015-04-17 18:06 17KFull MSA before JPred filters in FASTA
[ ]jp_ZdxYRkp.hmm2015-04-17 18:06 21KHHMer2 profile of the alignment
[TXT]jp_ZdxYRkp.html2015-04-17 18:06 14KHTML prediction and alignment data
[ ]jp_ZdxYRkp.input2015-04-17 17:01 118 Raw input data for analysis
[ ]jp_ZdxYRkp.jalview2015-04-17 18:06 3.1KJalview annotation file for alignment
[ ]jp_ZdxYRkp.jnet2015-04-17 18:06 4.1KJnet secondary structure output
[TXT]jp_ZdxYRkp.profile2015-04-17 18:05 18KPSIBLAST profile from alignment
[ ]jp_ZdxYRkp.pssm2015-04-17 18:06 24KPSIBLAST PSSM for Jnet
[TXT]jp_ZdxYRkp.results.html2016-02-15 12:19 55KJPred results page
[TXT]jp_ZdxYRkp.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_ZdxYRkp.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_ZdxYRkp.seq2015-04-17 17:01 125 Sequence data file
[TXT]jp_ZdxYRkp.simple.html2015-04-17 18:06 1.3KBrief HTML: sequence and prediction only
[TXT]jp_ZdxYRkp.svg.html2015-04-17 18:07 47KJalview SVG summary of results
[ ]jp_ZdxYRkp.tar.gz2015-04-17 18:07 54KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.