JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:40 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1vzma_.name2015-04-17 16:11 0 Job name flag file
[ ]jp_fHFDzVL.align2015-04-17 16:40 1.8KPSIBLAST alignment in FASTA format
[TXT]jp_fHFDzVL.als2015-04-17 16:40 1.5KAlscript command file for PS/PDF output
[ ]jp_fHFDzVL.blast.gz2015-04-17 16:40 7.8KCompressed PSIBLAST output file
[TXT]jp_fHFDzVL.coils.csv2015-04-17 16:40 288 COILS output in CSV format
[ ]jp_fHFDzVL.coilseq.lupas_142015-04-17 16:40 1.8KCOILS output, window length 14
[ ]jp_fHFDzVL.coilseq.lupas_212015-04-17 16:40 1.8KCOILS output, window length 21
[ ]jp_fHFDzVL.coilseq.lupas_282015-04-17 16:40 1.8KCOILS output, window length 28
[ ]jp_fHFDzVL.concise2015-04-17 16:40 5.2KPrediction: coiled-coil, solvent, alignment
[ ]jp_fHFDzVL.concise.blc2015-04-17 16:40 2.5KBLC format prediction and alignment data
[ ]jp_fHFDzVL.concise.fasta2015-04-17 16:40 2.4KPrediction: coiled-coil, solvent, alignment
[ ]jp_fHFDzVL.concise.pdf2015-04-17 16:40 15KPDF prediction and alignment data
[ ]jp_fHFDzVL.concise.ps2015-04-17 16:40 248KPrediction: coiled-coil, solvent, alignment
[ ]jp_fHFDzVL.fasta2015-04-17 16:35 56 Input query sequence in FASTA format
[ ]jp_fHFDzVL.full_MSA.fasta2015-04-17 16:40 7.7KFull MSA before JPred filters in FASTA
[TXT]jp_fHFDzVL.full_MSA.fasta.noGaps.html2015-04-17 16:40 21KFull MSA before JPred filters in FASTA
[TXT]jp_fHFDzVL.full_MSA.fasta.withGaps.html2015-04-17 16:40 24KFull MSA before JPred filters in FASTA
[ ]jp_fHFDzVL.hmm2015-04-17 16:40 8.1KHHMer2 profile of the alignment
[TXT]jp_fHFDzVL.html2015-04-17 16:40 13KHTML prediction and alignment data
[ ]jp_fHFDzVL.input2015-04-17 16:11 50 Raw input data for analysis
[ ]jp_fHFDzVL.jalview2015-04-17 16:40 1.7KJalview annotation file for alignment
[ ]jp_fHFDzVL.jnet2015-04-17 16:40 1.7KJnet secondary structure output
[TXT]jp_fHFDzVL.profile2015-04-17 16:38 7.3KPSIBLAST profile from alignment
[ ]jp_fHFDzVL.pssm2015-04-17 16:40 9.2KPSIBLAST PSSM for Jnet
[TXT]jp_fHFDzVL.results.html2016-02-15 12:19 28KJPred results page
[TXT]jp_fHFDzVL.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_fHFDzVL.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_fHFDzVL.seq2015-04-17 16:11 56 Sequence data file
[TXT]jp_fHFDzVL.simple.html2015-04-17 16:40 1.0KBrief HTML: sequence and prediction only
[TXT]jp_fHFDzVL.svg.html2015-04-17 16:40 20KJalview SVG summary of results
[ ]jp_fHFDzVL.tar.gz2015-04-17 16:40 44KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.