JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:40 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1vzya2.name2015-04-17 15:32 0 Job name flag file
[ ]jp_EEqnrO1.align2015-04-17 15:40 60KPSIBLAST alignment in FASTA format
[TXT]jp_EEqnrO1.als2015-04-17 15:40 1.9KAlscript command file for PS/PDF output
[ ]jp_EEqnrO1.blast.gz2015-04-17 15:40 350KCompressed PSIBLAST output file
[TXT]jp_EEqnrO1.coils.csv2015-04-17 15:40 372 COILS output in CSV format
[ ]jp_EEqnrO1.coilseq.lupas_142015-04-17 15:40 2.4KCOILS output, window length 14
[ ]jp_EEqnrO1.coilseq.lupas_212015-04-17 15:40 2.4KCOILS output, window length 21
[ ]jp_EEqnrO1.coilseq.lupas_282015-04-17 15:40 2.4KCOILS output, window length 28
[ ]jp_EEqnrO1.concise2015-04-17 15:40 113KPrediction: coiled-coil, solvent, alignment
[ ]jp_EEqnrO1.concise.blc2015-04-17 15:40 60KBLC format prediction and alignment data
[ ]jp_EEqnrO1.concise.fasta2015-04-17 15:40 61KPrediction: coiled-coil, solvent, alignment
[ ]jp_EEqnrO1.concise.pdf2015-04-17 15:40 324KPDF prediction and alignment data
[ ]jp_EEqnrO1.concise.ps2015-04-17 15:40 6.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_EEqnrO1.fasta2015-04-17 15:38 70 Input query sequence in FASTA format
[ ]jp_EEqnrO1.full_MSA.fasta2015-04-17 15:40 298KFull MSA before JPred filters in FASTA
[TXT]jp_EEqnrO1.full_MSA.fasta.noGaps.html2015-04-17 15:40 399KFull MSA before JPred filters in FASTA
[TXT]jp_EEqnrO1.full_MSA.fasta.withGaps.html2015-04-17 15:40 1.6MFull MSA before JPred filters in FASTA
[ ]jp_EEqnrO1.hmm2015-04-17 15:40 11KHHMer2 profile of the alignment
[TXT]jp_EEqnrO1.html2015-04-17 15:40 222KHTML prediction and alignment data
[ ]jp_EEqnrO1.input2015-04-17 15:32 64 Raw input data for analysis
[ ]jp_EEqnrO1.jalview2015-04-17 15:40 2.0KJalview annotation file for alignment
[ ]jp_EEqnrO1.jnet2015-04-17 15:40 2.2KJnet secondary structure output
[TXT]jp_EEqnrO1.profile2015-04-17 15:39 9.5KPSIBLAST profile from alignment
[ ]jp_EEqnrO1.pssm2015-04-17 15:40 12KPSIBLAST PSSM for Jnet
[TXT]jp_EEqnrO1.results.html2016-02-15 12:19 35KJPred results page
[TXT]jp_EEqnrO1.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_EEqnrO1.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_EEqnrO1.seq2015-04-17 15:32 70 Sequence data file
[TXT]jp_EEqnrO1.simple.html2015-04-17 15:40 1.1KBrief HTML: sequence and prediction only
[TXT]jp_EEqnrO1.svg.html2015-04-17 15:40 26KJalview SVG summary of results
[ ]jp_EEqnrO1.tar.gz2015-04-17 15:40 1.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.