JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:36 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1w0na_.name2015-04-17 16:45 0 Job name flag file
[ ]jp_mSmB9Xd.align2015-04-17 17:35 8.3KPSIBLAST alignment in FASTA format
[TXT]jp_mSmB9Xd.als2015-04-17 17:35 2.6KAlscript command file for PS/PDF output
[ ]jp_mSmB9Xd.blast.gz2015-04-17 17:35 19KCompressed PSIBLAST output file
[TXT]jp_mSmB9Xd.coils.csv2015-04-17 17:35 750 COILS output in CSV format
[ ]jp_mSmB9Xd.coilseq.lupas_142015-04-17 17:35 5.0KCOILS output, window length 14
[ ]jp_mSmB9Xd.coilseq.lupas_212015-04-17 17:35 5.0KCOILS output, window length 21
[ ]jp_mSmB9Xd.coilseq.lupas_282015-04-17 17:35 5.0KCOILS output, window length 28
[ ]jp_mSmB9Xd.concise2015-04-17 17:35 21KPrediction: coiled-coil, solvent, alignment
[ ]jp_mSmB9Xd.concise.blc2015-04-17 17:35 10KBLC format prediction and alignment data
[ ]jp_mSmB9Xd.concise.fasta2015-04-17 17:35 9.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_mSmB9Xd.concise.pdf2015-04-17 17:36 60KPDF prediction and alignment data
[ ]jp_mSmB9Xd.concise.ps2015-04-17 17:35 1.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_mSmB9Xd.fasta2015-04-17 17:32 134 Input query sequence in FASTA format
[ ]jp_mSmB9Xd.full_MSA.fasta2015-04-17 17:35 24KFull MSA before JPred filters in FASTA
[TXT]jp_mSmB9Xd.full_MSA.fasta.noGaps.html2015-04-17 17:36 24KFull MSA before JPred filters in FASTA
[TXT]jp_mSmB9Xd.full_MSA.fasta.withGaps.html2015-04-17 17:36 135KFull MSA before JPred filters in FASTA
[ ]jp_mSmB9Xd.hmm2015-04-17 17:35 23KHHMer2 profile of the alignment
[TXT]jp_mSmB9Xd.html2015-04-17 17:35 32KHTML prediction and alignment data
[ ]jp_mSmB9Xd.input2015-04-17 16:45 127 Raw input data for analysis
[ ]jp_mSmB9Xd.jalview2015-04-17 17:35 3.2KJalview annotation file for alignment
[ ]jp_mSmB9Xd.jnet2015-04-17 17:35 4.4KJnet secondary structure output
[TXT]jp_mSmB9Xd.profile2015-04-17 17:35 19KPSIBLAST profile from alignment
[ ]jp_mSmB9Xd.pssm2015-04-17 17:35 26KPSIBLAST PSSM for Jnet
[TXT]jp_mSmB9Xd.results.html2016-02-15 12:19 57KJPred results page
[TXT]jp_mSmB9Xd.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_mSmB9Xd.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_mSmB9Xd.seq2015-04-17 16:45 134 Sequence data file
[TXT]jp_mSmB9Xd.simple.html2015-04-17 17:35 1.3KBrief HTML: sequence and prediction only
[TXT]jp_mSmB9Xd.svg.html2015-04-17 17:36 49KJalview SVG summary of results
[ ]jp_mSmB9Xd.tar.gz2015-04-17 17:36 138KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.