JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:32 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1whza_.name2015-04-17 18:37 0 Job name flag file
[ ]jp_WOUUx2k.align2015-04-17 21:31 133KPSIBLAST alignment in FASTA format
[TXT]jp_WOUUx2k.als2015-04-17 21:31 2.1KAlscript command file for PS/PDF output
[ ]jp_WOUUx2k.blast.gz2015-04-17 21:29 369KCompressed PSIBLAST output file
[TXT]jp_WOUUx2k.coils.csv2015-04-17 21:31 450 COILS output in CSV format
[ ]jp_WOUUx2k.coilseq.lupas_142015-04-17 21:31 2.9KCOILS output, window length 14
[ ]jp_WOUUx2k.coilseq.lupas_212015-04-17 21:31 2.9KCOILS output, window length 21
[ ]jp_WOUUx2k.coilseq.lupas_282015-04-17 21:31 2.9KCOILS output, window length 28
[ ]jp_WOUUx2k.concise2015-04-17 21:31 253KPrediction: coiled-coil, solvent, alignment
[ ]jp_WOUUx2k.concise.blc2015-04-17 21:31 133KBLC format prediction and alignment data
[ ]jp_WOUUx2k.concise.fasta2015-04-17 21:31 134KPrediction: coiled-coil, solvent, alignment
[ ]jp_WOUUx2k.concise.pdf2015-04-17 21:32 816KPDF prediction and alignment data
[ ]jp_WOUUx2k.concise.ps2015-04-17 21:32 14MPrediction: coiled-coil, solvent, alignment
[ ]jp_WOUUx2k.fasta2015-04-17 20:35 83 Input query sequence in FASTA format
[ ]jp_WOUUx2k.full_MSA.fasta2015-04-17 21:29 711KFull MSA before JPred filters in FASTA
[TXT]jp_WOUUx2k.full_MSA.fasta.noGaps.html2015-04-17 21:32 391KFull MSA before JPred filters in FASTA
[TXT]jp_WOUUx2k.full_MSA.fasta.withGaps.html2015-04-17 21:32 3.6MFull MSA before JPred filters in FASTA
[ ]jp_WOUUx2k.hmm2015-04-17 21:31 13KHHMer2 profile of the alignment
[TXT]jp_WOUUx2k.html2015-04-17 21:31 435KHTML prediction and alignment data
[ ]jp_WOUUx2k.input2015-04-17 18:37 77 Raw input data for analysis
[ ]jp_WOUUx2k.jalview2015-04-17 21:31 2.2KJalview annotation file for alignment
[ ]jp_WOUUx2k.jnet2015-04-17 21:31 2.6KJnet secondary structure output
[TXT]jp_WOUUx2k.profile2015-04-17 21:12 12KPSIBLAST profile from alignment
[ ]jp_WOUUx2k.pssm2015-04-17 21:31 15KPSIBLAST PSSM for Jnet
[TXT]jp_WOUUx2k.results.html2016-02-15 12:19 39KJPred results page
[TXT]jp_WOUUx2k.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_WOUUx2k.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_WOUUx2k.seq2015-04-17 18:37 83 Sequence data file
[TXT]jp_WOUUx2k.simple.html2015-04-17 21:31 1.1KBrief HTML: sequence and prediction only
[TXT]jp_WOUUx2k.svg.html2015-04-17 21:32 31KJalview SVG summary of results
[ ]jp_WOUUx2k.tar.gz2015-04-17 21:32 1.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.