JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:39 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wtja_.name2015-04-17 16:46 0 Job name flag file
[ ]jp_eH64AmL.align2015-04-17 17:38 272KPSIBLAST alignment in FASTA format
[TXT]jp_eH64AmL.als2015-04-17 17:38 4.2KAlscript command file for PS/PDF output
[ ]jp_eH64AmL.blast.gz2015-04-17 17:37 2.4MCompressed PSIBLAST output file
[TXT]jp_eH64AmL.coils.csv2015-04-17 17:38 2.0KCOILS output in CSV format
[ ]jp_eH64AmL.coilseq.lupas_142015-04-17 17:38 14KCOILS output, window length 14
[ ]jp_eH64AmL.coilseq.lupas_212015-04-17 17:38 14KCOILS output, window length 21
[ ]jp_eH64AmL.coilseq.lupas_282015-04-17 17:38 14KCOILS output, window length 28
[ ]jp_eH64AmL.concise2015-04-17 17:38 542KPrediction: coiled-coil, solvent, alignment
[ ]jp_eH64AmL.concise.blc2015-04-17 17:38 273KBLC format prediction and alignment data
[ ]jp_eH64AmL.concise.fasta2015-04-17 17:38 275KPrediction: coiled-coil, solvent, alignment
[ ]jp_eH64AmL.concise.pdf2015-04-17 17:39 2.0MPDF prediction and alignment data
[ ]jp_eH64AmL.concise.ps2015-04-17 17:38 35MPrediction: coiled-coil, solvent, alignment
[ ]jp_eH64AmL.fasta2015-04-17 17:33 349 Input query sequence in FASTA format
[ ]jp_eH64AmL.full_MSA.fasta2015-04-17 17:38 2.9MFull MSA before JPred filters in FASTA
[TXT]jp_eH64AmL.full_MSA.fasta.noGaps.html2015-04-17 17:39 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_eH64AmL.full_MSA.fasta.withGaps.html2015-04-17 17:39 13MFull MSA before JPred filters in FASTA
[ ]jp_eH64AmL.hmm2015-04-17 17:38 62KHHMer2 profile of the alignment
[TXT]jp_eH64AmL.html2015-04-17 17:38 455KHTML prediction and alignment data
[ ]jp_eH64AmL.input2015-04-17 16:46 339 Raw input data for analysis
[ ]jp_eH64AmL.jalview2015-04-17 17:38 7.5KJalview annotation file for alignment
[ ]jp_eH64AmL.jnet2015-04-17 17:38 12KJnet secondary structure output
[TXT]jp_eH64AmL.profile2015-04-17 17:36 53KPSIBLAST profile from alignment
[ ]jp_eH64AmL.pssm2015-04-17 17:38 71KPSIBLAST PSSM for Jnet
[TXT]jp_eH64AmL.results.html2016-02-15 12:19 140KJPred results page
[TXT]jp_eH64AmL.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_eH64AmL.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_eH64AmL.seq2015-04-17 16:46 349 Sequence data file
[TXT]jp_eH64AmL.simple.html2015-04-17 17:38 2.0KBrief HTML: sequence and prediction only
[TXT]jp_eH64AmL.svg.html2015-04-17 17:39 132KJalview SVG summary of results
[ ]jp_eH64AmL.tar.gz2015-04-17 17:39 6.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.