JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:39 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wy6a_.name2015-04-17 18:37 0 Job name flag file
[ ]jp_rTMYu91.align2015-04-17 20:39 1.9KPSIBLAST alignment in FASTA format
[TXT]jp_rTMYu91.als2015-04-17 20:39 2.6KAlscript command file for PS/PDF output
[ ]jp_rTMYu91.blast.gz2015-04-17 20:39 3.4KCompressed PSIBLAST output file
[TXT]jp_rTMYu91.coils.csv2015-04-17 20:39 1.0KCOILS output in CSV format
[ ]jp_rTMYu91.coilseq.lupas_142015-04-17 20:39 6.7KCOILS output, window length 14
[ ]jp_rTMYu91.coilseq.lupas_212015-04-17 20:39 6.7KCOILS output, window length 21
[ ]jp_rTMYu91.coilseq.lupas_282015-04-17 20:39 6.7KCOILS output, window length 28
[ ]jp_rTMYu91.concise2015-04-17 20:39 10KPrediction: coiled-coil, solvent, alignment
[ ]jp_rTMYu91.concise.blc2015-04-17 20:39 4.3KBLC format prediction and alignment data
[ ]jp_rTMYu91.concise.fasta2015-04-17 20:39 3.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_rTMYu91.concise.pdf2015-04-17 20:39 31KPDF prediction and alignment data
[ ]jp_rTMYu91.concise.ps2015-04-17 20:39 530KPrediction: coiled-coil, solvent, alignment
[ ]jp_rTMYu91.fasta2015-04-17 20:36 174 Input query sequence in FASTA format
[ ]jp_rTMYu91.full_MSA.fasta2015-04-17 20:39 2.2KFull MSA before JPred filters in FASTA
[TXT]jp_rTMYu91.full_MSA.fasta.noGaps.html2015-04-17 20:39 3.4KFull MSA before JPred filters in FASTA
[TXT]jp_rTMYu91.full_MSA.fasta.withGaps.html2015-04-17 20:39 4.6KFull MSA before JPred filters in FASTA
[ ]jp_rTMYu91.hmm2015-04-17 20:39 30KHHMer2 profile of the alignment
[TXT]jp_rTMYu91.html2015-04-17 20:39 22KHTML prediction and alignment data
[ ]jp_rTMYu91.input2015-04-17 18:37 166 Raw input data for analysis
[ ]jp_rTMYu91.jalview2015-04-17 20:39 4.1KJalview annotation file for alignment
[ ]jp_rTMYu91.jnet2015-04-17 20:39 5.9KJnet secondary structure output
[TXT]jp_rTMYu91.profile2015-04-17 20:38 26KPSIBLAST profile from alignment
[ ]jp_rTMYu91.pssm2015-04-17 20:39 34KPSIBLAST PSSM for Jnet
[TXT]jp_rTMYu91.results.html2016-02-15 12:19 74KJPred results page
[TXT]jp_rTMYu91.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_rTMYu91.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_rTMYu91.seq2015-04-17 18:37 174 Sequence data file
[TXT]jp_rTMYu91.simple.html2015-04-17 20:39 1.4KBrief HTML: sequence and prediction only
[TXT]jp_rTMYu91.svg.html2015-04-17 20:39 66KJalview SVG summary of results
[ ]jp_rTMYu91.tar.gz2015-04-17 20:39 74KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.