JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:46 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1x9za_.name2015-04-17 16:12 0 Job name flag file
[ ]jp_JuohJDq.align2015-04-17 16:45 160KPSIBLAST alignment in FASTA format
[TXT]jp_JuohJDq.als2015-04-17 16:45 3.2KAlscript command file for PS/PDF output
[ ]jp_JuohJDq.blast.gz2015-04-17 16:44 2.8MCompressed PSIBLAST output file
[TXT]jp_JuohJDq.coils.csv2015-04-17 16:45 1.1KCOILS output in CSV format
[ ]jp_JuohJDq.coilseq.lupas_142015-04-17 16:45 7.6KCOILS output, window length 14
[ ]jp_JuohJDq.coilseq.lupas_212015-04-17 16:45 7.6KCOILS output, window length 21
[ ]jp_JuohJDq.coilseq.lupas_282015-04-17 16:45 7.6KCOILS output, window length 28
[ ]jp_JuohJDq.concise2015-04-17 16:45 315KPrediction: coiled-coil, solvent, alignment
[ ]jp_JuohJDq.concise.blc2015-04-17 16:45 160KBLC format prediction and alignment data
[ ]jp_JuohJDq.concise.fasta2015-04-17 16:45 161KPrediction: coiled-coil, solvent, alignment
[ ]jp_JuohJDq.concise.pdf2015-04-17 16:45 1.1MPDF prediction and alignment data
[ ]jp_JuohJDq.concise.ps2015-04-17 16:45 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_JuohJDq.fasta2015-04-17 16:36 197 Input query sequence in FASTA format
[ ]jp_JuohJDq.full_MSA.fasta2015-04-17 16:45 9.7MFull MSA before JPred filters in FASTA
[TXT]jp_JuohJDq.full_MSA.fasta.noGaps.html2015-04-17 16:46 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_JuohJDq.full_MSA.fasta.withGaps.html2015-04-17 16:46 26MFull MSA before JPred filters in FASTA
[ ]jp_JuohJDq.hmm2015-04-17 16:45 34KHHMer2 profile of the alignment
[TXT]jp_JuohJDq.html2015-04-17 16:45 333KHTML prediction and alignment data
[ ]jp_JuohJDq.input2015-04-17 16:12 189 Raw input data for analysis
[ ]jp_JuohJDq.jalview2015-04-17 16:45 4.5KJalview annotation file for alignment
[ ]jp_JuohJDq.jnet2015-04-17 16:45 6.7KJnet secondary structure output
[TXT]jp_JuohJDq.profile2015-04-17 16:42 29KPSIBLAST profile from alignment
[ ]jp_JuohJDq.pssm2015-04-17 16:45 39KPSIBLAST PSSM for Jnet
[TXT]jp_JuohJDq.results.html2016-02-15 12:19 83KJPred results page
[TXT]jp_JuohJDq.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_JuohJDq.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_JuohJDq.seq2015-04-17 16:12 197 Sequence data file
[TXT]jp_JuohJDq.simple.html2015-04-17 16:45 1.6KBrief HTML: sequence and prediction only
[TXT]jp_JuohJDq.svg.html2015-04-17 16:46 75KJalview SVG summary of results
[ ]jp_JuohJDq.tar.gz2015-04-17 16:46 6.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.