JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1xg0a_.name2015-04-17 15:34 0 Job name flag file
[ ]jp_JUqq0hi.align2015-04-17 15:42 2.8KPSIBLAST alignment in FASTA format
[TXT]jp_JUqq0hi.als2015-04-17 15:42 1.7KAlscript command file for PS/PDF output
[ ]jp_JUqq0hi.blast.gz2015-04-17 15:42 5.2KCompressed PSIBLAST output file
[TXT]jp_JUqq0hi.coils.csv2015-04-17 15:42 486 COILS output in CSV format
[ ]jp_JUqq0hi.coilseq.lupas_142015-04-17 15:42 3.2KCOILS output, window length 14
[ ]jp_JUqq0hi.coilseq.lupas_212015-04-17 15:42 3.2KCOILS output, window length 21
[ ]jp_JUqq0hi.coilseq.lupas_282015-04-17 15:42 3.2KCOILS output, window length 28
[ ]jp_JUqq0hi.concise2015-04-17 15:42 8.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_JUqq0hi.concise.blc2015-04-17 15:42 3.9KBLC format prediction and alignment data
[ ]jp_JUqq0hi.concise.fasta2015-04-17 15:42 3.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_JUqq0hi.concise.pdf2015-04-17 15:42 22KPDF prediction and alignment data
[ ]jp_JUqq0hi.concise.ps2015-04-17 15:42 412KPrediction: coiled-coil, solvent, alignment
[ ]jp_JUqq0hi.fasta2015-04-17 15:41 90 Input query sequence in FASTA format
[ ]jp_JUqq0hi.full_MSA.fasta2015-04-17 15:42 3.6KFull MSA before JPred filters in FASTA
[TXT]jp_JUqq0hi.full_MSA.fasta.noGaps.html2015-04-17 15:42 6.6KFull MSA before JPred filters in FASTA
[TXT]jp_JUqq0hi.full_MSA.fasta.withGaps.html2015-04-17 15:42 18KFull MSA before JPred filters in FASTA
[ ]jp_JUqq0hi.hmm2015-04-17 15:42 14KHHMer2 profile of the alignment
[TXT]jp_JUqq0hi.html2015-04-17 15:42 15KHTML prediction and alignment data
[ ]jp_JUqq0hi.input2015-04-17 15:34 83 Raw input data for analysis
[ ]jp_JUqq0hi.jalview2015-04-17 15:42 2.3KJalview annotation file for alignment
[ ]jp_JUqq0hi.jnet2015-04-17 15:42 2.9KJnet secondary structure output
[TXT]jp_JUqq0hi.profile2015-04-17 15:42 13KPSIBLAST profile from alignment
[ ]jp_JUqq0hi.pssm2015-04-17 15:42 16KPSIBLAST PSSM for Jnet
[TXT]jp_JUqq0hi.results.html2016-02-15 12:19 40KJPred results page
[TXT]jp_JUqq0hi.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_JUqq0hi.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_JUqq0hi.seq2015-04-17 15:34 90 Sequence data file
[TXT]jp_JUqq0hi.simple.html2015-04-17 15:42 1.1KBrief HTML: sequence and prediction only
[TXT]jp_JUqq0hi.svg.html2015-04-17 15:42 32KJalview SVG summary of results
[ ]jp_JUqq0hi.tar.gz2015-04-17 15:43 57KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.