JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:34 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1y0na_.name2015-04-17 17:25 0 Job name flag file
[ ]jp_qFzpzGr.align2015-04-17 18:34 19KPSIBLAST alignment in FASTA format
[TXT]jp_qFzpzGr.als2015-04-17 18:34 2.0KAlscript command file for PS/PDF output
[ ]jp_qFzpzGr.blast.gz2015-04-17 18:34 47KCompressed PSIBLAST output file
[TXT]jp_qFzpzGr.coils.csv2015-04-17 18:34 456 COILS output in CSV format
[ ]jp_qFzpzGr.coilseq.lupas_142015-04-17 18:34 3.0KCOILS output, window length 14
[ ]jp_qFzpzGr.coilseq.lupas_212015-04-17 18:34 3.0KCOILS output, window length 21
[ ]jp_qFzpzGr.coilseq.lupas_282015-04-17 18:34 3.0KCOILS output, window length 28
[ ]jp_qFzpzGr.concise2015-04-17 18:34 38KPrediction: coiled-coil, solvent, alignment
[ ]jp_qFzpzGr.concise.blc2015-04-17 18:34 20KBLC format prediction and alignment data
[ ]jp_qFzpzGr.concise.fasta2015-04-17 18:34 20KPrediction: coiled-coil, solvent, alignment
[ ]jp_qFzpzGr.concise.pdf2015-04-17 18:34 117KPDF prediction and alignment data
[ ]jp_qFzpzGr.concise.ps2015-04-17 18:34 2.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_qFzpzGr.fasta2015-04-17 18:32 84 Input query sequence in FASTA format
[ ]jp_qFzpzGr.full_MSA.fasta2015-04-17 18:34 67KFull MSA before JPred filters in FASTA
[TXT]jp_qFzpzGr.full_MSA.fasta.noGaps.html2015-04-17 18:34 68KFull MSA before JPred filters in FASTA
[TXT]jp_qFzpzGr.full_MSA.fasta.withGaps.html2015-04-17 18:34 235KFull MSA before JPred filters in FASTA
[ ]jp_qFzpzGr.hmm2015-04-17 18:34 13KHHMer2 profile of the alignment
[TXT]jp_qFzpzGr.html2015-04-17 18:34 68KHTML prediction and alignment data
[ ]jp_qFzpzGr.input2015-04-17 17:25 78 Raw input data for analysis
[ ]jp_qFzpzGr.jalview2015-04-17 18:34 2.3KJalview annotation file for alignment
[ ]jp_qFzpzGr.jnet2015-04-17 18:34 2.7KJnet secondary structure output
[TXT]jp_qFzpzGr.profile2015-04-17 18:34 12KPSIBLAST profile from alignment
[ ]jp_qFzpzGr.pssm2015-04-17 18:34 15KPSIBLAST PSSM for Jnet
[TXT]jp_qFzpzGr.results.html2016-02-15 12:19 40KJPred results page
[TXT]jp_qFzpzGr.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_qFzpzGr.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_qFzpzGr.seq2015-04-17 17:25 84 Sequence data file
[TXT]jp_qFzpzGr.simple.html2015-04-17 18:34 1.1KBrief HTML: sequence and prediction only
[TXT]jp_qFzpzGr.svg.html2015-04-17 18:34 31KJalview SVG summary of results
[ ]jp_qFzpzGr.tar.gz2015-04-17 18:34 240KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.