JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]d1z0pa1.name2015-04-17 19:16 0 Job name flag file
[ ]jp_glx6JGK.input2015-04-17 19:16 80 Raw input data for analysis
[ ]jp_glx6JGK.fasta2015-04-17 21:43 87 Input query sequence in FASTA format
[ ]jp_glx6JGK.seq2015-04-17 19:16 87 Sequence data file
[TXT]jp_glx6JGK.coils.csv2015-04-17 21:44 468 COILS output in CSV format
[TXT]jp_glx6JGK.simple.html2015-04-17 21:44 1.1KBrief HTML: sequence and prediction only
[TXT]jp_glx6JGK.als2015-04-17 21:44 1.6KAlscript command file for PS/PDF output
[ ]jp_glx6JGK.align2015-04-17 21:44 1.9KPSIBLAST alignment in FASTA format
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[ ]jp_glx6JGK.jalview2015-04-17 21:44 2.3KJalview annotation file for alignment
[ ]jp_glx6JGK.jnet2015-04-17 21:44 2.7KJnet secondary structure output
[ ]jp_glx6JGK.concise.fasta2015-04-17 21:44 2.8KPrediction: coiled-coil, solvent, alignment
[ ]jp_glx6JGK.coilseq.lupas_142015-04-17 21:44 3.1KCOILS output, window length 14
[ ]jp_glx6JGK.coilseq.lupas_212015-04-17 21:44 3.1KCOILS output, window length 21
[ ]jp_glx6JGK.coilseq.lupas_282015-04-17 21:44 3.1KCOILS output, window length 28
[ ]jp_glx6JGK.concise.blc2015-04-17 21:44 3.1KBLC format prediction and alignment data
[TXT]LOG2015-04-17 21:44 4.7KJPred server log file
[ ]jp_glx6JGK.full_MSA.fasta2015-04-17 21:44 4.7KFull MSA before JPred filters in FASTA
[ ]jp_glx6JGK.blast.gz2015-04-17 21:44 4.9KCompressed PSIBLAST output file
[ ]jp_glx6JGK.concise2015-04-17 21:44 6.8KPrediction: coiled-coil, solvent, alignment
[TXT]jp_glx6JGK.full_MSA.fasta.noGaps.html2015-04-17 21:44 9.3KFull MSA before JPred filters in FASTA
[TXT]jp_glx6JGK.profile2015-04-17 21:43 12KPSIBLAST profile from alignment
[TXT]jp_glx6JGK.full_MSA.fasta.withGaps.html2015-04-17 21:44 13KFull MSA before JPred filters in FASTA
[TXT]jp_glx6JGK.results_jalview.html2016-02-24 17:18 13KJalview results options
[ ]jp_glx6JGK.hmm2015-04-17 21:44 14KHHMer2 profile of the alignment
[TXT]jp_glx6JGK.html2015-04-17 21:44 15KHTML prediction and alignment data
[ ]jp_glx6JGK.pssm2015-04-17 21:44 16KPSIBLAST PSSM for Jnet
[TXT]jp_glx6JGK.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_glx6JGK.concise.pdf2015-04-17 21:44 18KPDF prediction and alignment data
[TXT]jp_glx6JGK.svg.html2015-04-17 21:44 31KJalview SVG summary of results
[TXT]jp_glx6JGK.results.html2016-02-15 12:19 39KJPred results page
[ ]jp_glx6JGK.tar.gz2015-04-17 21:44 47KArchive containing complete results
[ ]jp_glx6JGK.concise.ps2015-04-17 21:44 331KPrediction: coiled-coil, solvent, alignment
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.