JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_9t3t6b6.tar.gz2015-04-17 16:44 702KArchive containing complete results
[TXT]jp_9t3t6b6.svg.html2015-04-17 16:44 53KJalview SVG summary of results
[TXT]jp_9t3t6b6.simple.html2015-04-17 16:44 1.3KBrief HTML: sequence and prediction only
[ ]jp_9t3t6b6.seq2015-04-17 16:13 141 Sequence data file
[TXT]jp_9t3t6b6.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[TXT]jp_9t3t6b6.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_9t3t6b6.results.html2016-02-15 12:19 61KJPred results page
[ ]jp_9t3t6b6.pssm2015-04-17 16:44 27KPSIBLAST PSSM for Jnet
[TXT]jp_9t3t6b6.profile2015-04-17 16:43 21KPSIBLAST profile from alignment
[ ]jp_9t3t6b6.jnet2015-04-17 16:44 4.7KJnet secondary structure output
[ ]jp_9t3t6b6.jalview2015-04-17 16:44 3.4KJalview annotation file for alignment
[ ]jp_9t3t6b6.input2015-04-17 16:13 134 Raw input data for analysis
[TXT]jp_9t3t6b6.html2015-04-17 16:44 133KHTML prediction and alignment data
[ ]jp_9t3t6b6.hmm2015-04-17 16:44 24KHHMer2 profile of the alignment
[TXT]jp_9t3t6b6.full_MSA.fasta.withGaps.html2015-04-17 16:44 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_9t3t6b6.full_MSA.fasta.noGaps.html2015-04-17 16:44 129KFull MSA before JPred filters in FASTA
[ ]jp_9t3t6b6.full_MSA.fasta2015-04-17 16:44 217KFull MSA before JPred filters in FASTA
[ ]jp_9t3t6b6.fasta2015-04-17 16:40 141 Input query sequence in FASTA format
[ ]jp_9t3t6b6.concise.ps2015-04-17 16:44 6.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_9t3t6b6.concise.pdf2015-04-17 16:44 333KPDF prediction and alignment data
[ ]jp_9t3t6b6.concise.fasta2015-04-17 16:44 52KPrediction: coiled-coil, solvent, alignment
[ ]jp_9t3t6b6.concise.blc2015-04-17 16:44 52KBLC format prediction and alignment data
[ ]jp_9t3t6b6.concise2015-04-17 16:44 103KPrediction: coiled-coil, solvent, alignment
[ ]jp_9t3t6b6.coilseq.lupas_282015-04-17 16:44 5.3KCOILS output, window length 28
[ ]jp_9t3t6b6.coilseq.lupas_212015-04-17 16:44 5.3KCOILS output, window length 21
[ ]jp_9t3t6b6.coilseq.lupas_142015-04-17 16:44 5.3KCOILS output, window length 14
[TXT]jp_9t3t6b6.coils.csv2015-04-17 16:44 792 COILS output in CSV format
[ ]jp_9t3t6b6.blast.gz2015-04-17 16:44 179KCompressed PSIBLAST output file
[TXT]jp_9t3t6b6.als2015-04-17 16:44 2.4KAlscript command file for PS/PDF output
[ ]jp_9t3t6b6.align2015-04-17 16:44 51KPSIBLAST alignment in FASTA format
[TXT]d1z67a1.name2015-04-17 16:13 0 Job name flag file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]LOG2015-04-17 16:44 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.