JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:38 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1zela2.name2015-04-17 17:26 0 Job name flag file
[ ]jp_I8GzPuI.align2015-04-17 18:38 2.0KPSIBLAST alignment in FASTA format
[TXT]jp_I8GzPuI.als2015-04-17 18:38 3.4KAlscript command file for PS/PDF output
[ ]jp_I8GzPuI.blast.gz2015-04-17 18:38 3.8KCompressed PSIBLAST output file
[TXT]jp_I8GzPuI.coils.csv2015-04-17 18:38 1.3KCOILS output in CSV format
[ ]jp_I8GzPuI.coilseq.lupas_142015-04-17 18:38 8.8KCOILS output, window length 14
[ ]jp_I8GzPuI.coilseq.lupas_212015-04-17 18:38 8.8KCOILS output, window length 21
[ ]jp_I8GzPuI.coilseq.lupas_282015-04-17 18:38 8.8KCOILS output, window length 28
[ ]jp_I8GzPuI.concise2015-04-17 18:38 13KPrediction: coiled-coil, solvent, alignment
[ ]jp_I8GzPuI.concise.blc2015-04-17 18:38 5.2KBLC format prediction and alignment data
[ ]jp_I8GzPuI.concise.fasta2015-04-17 18:38 4.2KPrediction: coiled-coil, solvent, alignment
[ ]jp_I8GzPuI.concise.pdf2015-04-17 18:38 35KPDF prediction and alignment data
[ ]jp_I8GzPuI.concise.ps2015-04-17 18:38 604KPrediction: coiled-coil, solvent, alignment
[ ]jp_I8GzPuI.fasta2015-04-17 18:36 224 Input query sequence in FASTA format
[ ]jp_I8GzPuI.full_MSA.fasta2015-04-17 18:38 2.7KFull MSA before JPred filters in FASTA
[TXT]jp_I8GzPuI.full_MSA.fasta.noGaps.html2015-04-17 18:38 3.6KFull MSA before JPred filters in FASTA
[TXT]jp_I8GzPuI.full_MSA.fasta.withGaps.html2015-04-17 18:38 5.6KFull MSA before JPred filters in FASTA
[ ]jp_I8GzPuI.hmm2015-04-17 18:38 39KHHMer2 profile of the alignment
[TXT]jp_I8GzPuI.html2015-04-17 18:38 23KHTML prediction and alignment data
[ ]jp_I8GzPuI.input2015-04-17 17:26 216 Raw input data for analysis
[ ]jp_I8GzPuI.jalview2015-04-17 18:38 5.0KJalview annotation file for alignment
[ ]jp_I8GzPuI.jnet2015-04-17 18:38 7.7KJnet secondary structure output
[TXT]jp_I8GzPuI.profile2015-04-17 18:37 34KPSIBLAST profile from alignment
[ ]jp_I8GzPuI.pssm2015-04-17 18:38 45KPSIBLAST PSSM for Jnet
[TXT]jp_I8GzPuI.results.html2016-02-15 12:19 94KJPred results page
[TXT]jp_I8GzPuI.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_I8GzPuI.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_I8GzPuI.seq2015-04-17 17:26 224 Sequence data file
[TXT]jp_I8GzPuI.simple.html2015-04-17 18:38 1.6KBrief HTML: sequence and prediction only
[TXT]jp_I8GzPuI.svg.html2015-04-17 18:38 86KJalview SVG summary of results
[ ]jp_I8GzPuI.tar.gz2015-04-17 18:38 89KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.