JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:06 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1zgka1.name2015-04-17 15:35 0 Job name flag file
[ ]jp_wyS4KWK.align2015-04-17 16:03 106KPSIBLAST alignment in FASTA format
[TXT]jp_wyS4KWK.als2015-04-17 16:03 4.2KAlscript command file for PS/PDF output
[ ]jp_wyS4KWK.blast.gz2015-04-17 15:56 65MCompressed PSIBLAST output file
[TXT]jp_wyS4KWK.coils.csv2015-04-17 16:03 1.7KCOILS output in CSV format
[ ]jp_wyS4KWK.coilseq.lupas_142015-04-17 16:03 12KCOILS output, window length 14
[ ]jp_wyS4KWK.coilseq.lupas_212015-04-17 16:03 12KCOILS output, window length 21
[ ]jp_wyS4KWK.coilseq.lupas_282015-04-17 16:03 12KCOILS output, window length 28
[ ]jp_wyS4KWK.concise2015-04-17 16:03 217KPrediction: coiled-coil, solvent, alignment
[ ]jp_wyS4KWK.concise.blc2015-04-17 16:03 108KBLC format prediction and alignment data
[ ]jp_wyS4KWK.concise.fasta2015-04-17 16:03 109KPrediction: coiled-coil, solvent, alignment
[ ]jp_wyS4KWK.concise.pdf2015-04-17 16:03 717KPDF prediction and alignment data
[ ]jp_wyS4KWK.concise.ps2015-04-17 16:03 13MPrediction: coiled-coil, solvent, alignment
[ ]jp_wyS4KWK.fasta2015-04-17 15:43 305 Input query sequence in FASTA format
[ ]jp_wyS4KWK.full_MSA.fasta2015-04-17 16:01 130MFull MSA before JPred filters in FASTA
[TXT]jp_wyS4KWK.full_MSA.fasta.noGaps.html2015-04-17 16:06 9.8MFull MSA before JPred filters in FASTA
[TXT]jp_wyS4KWK.full_MSA.fasta.withGaps.html2015-04-17 16:06 295MFull MSA before JPred filters in FASTA
[ ]jp_wyS4KWK.hmm2015-04-17 16:03 54KHHMer2 profile of the alignment
[TXT]jp_wyS4KWK.html2015-04-17 16:03 196KHTML prediction and alignment data
[ ]jp_wyS4KWK.input2015-04-17 15:35 295 Raw input data for analysis
[ ]jp_wyS4KWK.jalview2015-04-17 16:03 6.4KJalview annotation file for alignment
[ ]jp_wyS4KWK.jnet2015-04-17 16:03 11KJnet secondary structure output
[TXT]jp_wyS4KWK.profile2015-04-17 15:54 46KPSIBLAST profile from alignment
[ ]jp_wyS4KWK.pssm2015-04-17 16:03 62KPSIBLAST PSSM for Jnet
[TXT]jp_wyS4KWK.results.html2016-02-15 12:19 121KJPred results page
[TXT]jp_wyS4KWK.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_wyS4KWK.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_wyS4KWK.seq2015-04-17 15:35 305 Sequence data file
[TXT]jp_wyS4KWK.simple.html2015-04-17 16:03 2.0KBrief HTML: sequence and prediction only
[TXT]jp_wyS4KWK.svg.html2015-04-17 16:06 113KJalview SVG summary of results
[ ]jp_wyS4KWK.tar.gz2015-04-17 16:06 88MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.