JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:51 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1zhxa_.name2015-04-17 16:48 0 Job name flag file
[ ]jp_R5Y6Wlw.align2015-04-17 17:50 272KPSIBLAST alignment in FASTA format
[TXT]jp_R5Y6Wlw.als2015-04-17 17:50 6.0KAlscript command file for PS/PDF output
[ ]jp_R5Y6Wlw.blast.gz2015-04-17 17:46 8.8MCompressed PSIBLAST output file
[TXT]jp_R5Y6Wlw.coils.csv2015-04-17 17:50 2.6KCOILS output in CSV format
[ ]jp_R5Y6Wlw.coilseq.lupas_142015-04-17 17:50 18KCOILS output, window length 14
[ ]jp_R5Y6Wlw.coilseq.lupas_212015-04-17 17:50 18KCOILS output, window length 21
[ ]jp_R5Y6Wlw.coilseq.lupas_282015-04-17 17:50 18KCOILS output, window length 28
[ ]jp_R5Y6Wlw.concise2015-04-17 17:50 549KPrediction: coiled-coil, solvent, alignment
[ ]jp_R5Y6Wlw.concise.blc2015-04-17 17:50 275KBLC format prediction and alignment data
[ ]jp_R5Y6Wlw.concise.fasta2015-04-17 17:50 277KPrediction: coiled-coil, solvent, alignment
[ ]jp_R5Y6Wlw.concise.pdf2015-04-17 17:51 1.7MPDF prediction and alignment data
[ ]jp_R5Y6Wlw.concise.ps2015-04-17 17:50 34MPrediction: coiled-coil, solvent, alignment
[ ]jp_R5Y6Wlw.fasta2015-04-17 17:39 455 Input query sequence in FASTA format
[ ]jp_R5Y6Wlw.full_MSA.fasta2015-04-17 17:49 19MFull MSA before JPred filters in FASTA
[TXT]jp_R5Y6Wlw.full_MSA.fasta.noGaps.html2015-04-17 17:51 1.7MFull MSA before JPred filters in FASTA
[TXT]jp_R5Y6Wlw.full_MSA.fasta.withGaps.html2015-04-17 17:51 45MFull MSA before JPred filters in FASTA
[ ]jp_R5Y6Wlw.hmm2015-04-17 17:50 82KHHMer2 profile of the alignment
[TXT]jp_R5Y6Wlw.html2015-04-17 17:50 421KHTML prediction and alignment data
[ ]jp_R5Y6Wlw.input2015-04-17 16:48 443 Raw input data for analysis
[ ]jp_R5Y6Wlw.jalview2015-04-17 17:50 9.5KJalview annotation file for alignment
[ ]jp_R5Y6Wlw.jnet2015-04-17 17:50 16KJnet secondary structure output
[TXT]jp_R5Y6Wlw.profile2015-04-17 17:43 69KPSIBLAST profile from alignment
[ ]jp_R5Y6Wlw.pssm2015-04-17 17:50 94KPSIBLAST PSSM for Jnet
[TXT]jp_R5Y6Wlw.results.html2016-02-15 12:19 181KJPred results page
[TXT]jp_R5Y6Wlw.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_R5Y6Wlw.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_R5Y6Wlw.seq2015-04-17 16:48 455 Sequence data file
[TXT]jp_R5Y6Wlw.simple.html2015-04-17 17:50 2.5KBrief HTML: sequence and prediction only
[TXT]jp_R5Y6Wlw.svg.html2015-04-17 17:51 173KJalview SVG summary of results
[ ]jp_R5Y6Wlw.tar.gz2015-04-17 17:52 15MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.