JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:41 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1zt3a_.name2015-04-17 18:38 0 Job name flag file
[ ]jp_crd58Ki.align2015-04-17 20:41 55KPSIBLAST alignment in FASTA format
[TXT]jp_crd58Ki.als2015-04-17 20:41 1.8KAlscript command file for PS/PDF output
[ ]jp_crd58Ki.blast.gz2015-04-17 20:40 420KCompressed PSIBLAST output file
[TXT]jp_crd58Ki.coils.csv2015-04-17 20:41 510 COILS output in CSV format
[ ]jp_crd58Ki.coilseq.lupas_142015-04-17 20:41 3.4KCOILS output, window length 14
[ ]jp_crd58Ki.coilseq.lupas_212015-04-17 20:41 3.4KCOILS output, window length 21
[ ]jp_crd58Ki.coilseq.lupas_282015-04-17 20:41 3.4KCOILS output, window length 28
[ ]jp_crd58Ki.concise2015-04-17 20:41 104KPrediction: coiled-coil, solvent, alignment
[ ]jp_crd58Ki.concise.blc2015-04-17 20:41 55KBLC format prediction and alignment data
[ ]jp_crd58Ki.concise.fasta2015-04-17 20:41 56KPrediction: coiled-coil, solvent, alignment
[ ]jp_crd58Ki.concise.pdf2015-04-17 20:41 280KPDF prediction and alignment data
[ ]jp_crd58Ki.concise.ps2015-04-17 20:41 5.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_crd58Ki.fasta2015-04-17 20:36 94 Input query sequence in FASTA format
[ ]jp_crd58Ki.full_MSA.fasta2015-04-17 20:40 733KFull MSA before JPred filters in FASTA
[TXT]jp_crd58Ki.full_MSA.fasta.noGaps.html2015-04-17 20:41 503KFull MSA before JPred filters in FASTA
[TXT]jp_crd58Ki.full_MSA.fasta.withGaps.html2015-04-17 20:41 4.0MFull MSA before JPred filters in FASTA
[ ]jp_crd58Ki.hmm2015-04-17 20:41 15KHHMer2 profile of the alignment
[TXT]jp_crd58Ki.html2015-04-17 20:41 166KHTML prediction and alignment data
[ ]jp_crd58Ki.input2015-04-17 18:38 87 Raw input data for analysis
[ ]jp_crd58Ki.jalview2015-04-17 20:41 2.4KJalview annotation file for alignment
[ ]jp_crd58Ki.jnet2015-04-17 20:41 3.0KJnet secondary structure output
[TXT]jp_crd58Ki.profile2015-04-17 20:39 13KPSIBLAST profile from alignment
[ ]jp_crd58Ki.pssm2015-04-17 20:41 17KPSIBLAST PSSM for Jnet
[TXT]jp_crd58Ki.results.html2016-02-15 12:19 41KJPred results page
[TXT]jp_crd58Ki.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_crd58Ki.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_crd58Ki.seq2015-04-17 18:38 94 Sequence data file
[TXT]jp_crd58Ki.simple.html2015-04-17 20:41 1.1KBrief HTML: sequence and prediction only
[TXT]jp_crd58Ki.svg.html2015-04-17 20:41 33KJalview SVG summary of results
[ ]jp_crd58Ki.tar.gz2015-04-17 20:41 1.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.