JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:44 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1zzka_.name2015-04-17 18:03 0 Job name flag file
[ ]jp_HpR_w4K.align2015-04-17 19:43 67KPSIBLAST alignment in FASTA format
[TXT]jp_HpR_w4K.als2015-04-17 19:43 2.1KAlscript command file for PS/PDF output
[ ]jp_HpR_w4K.blast.gz2015-04-17 19:42 5.3MCompressed PSIBLAST output file
[TXT]jp_HpR_w4K.coils.csv2015-04-17 19:43 510 COILS output in CSV format
[ ]jp_HpR_w4K.coilseq.lupas_142015-04-17 19:43 3.4KCOILS output, window length 14
[ ]jp_HpR_w4K.coilseq.lupas_212015-04-17 19:43 3.4KCOILS output, window length 21
[ ]jp_HpR_w4K.coilseq.lupas_282015-04-17 19:43 3.4KCOILS output, window length 28
[ ]jp_HpR_w4K.concise2015-04-17 19:43 128KPrediction: coiled-coil, solvent, alignment
[ ]jp_HpR_w4K.concise.blc2015-04-17 19:43 67KBLC format prediction and alignment data
[ ]jp_HpR_w4K.concise.fasta2015-04-17 19:43 68KPrediction: coiled-coil, solvent, alignment
[ ]jp_HpR_w4K.concise.pdf2015-04-17 19:43 417KPDF prediction and alignment data
[ ]jp_HpR_w4K.concise.ps2015-04-17 19:43 7.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_HpR_w4K.fasta2015-04-17 19:39 94 Input query sequence in FASTA format
[ ]jp_HpR_w4K.full_MSA.fasta2015-04-17 19:43 16MFull MSA before JPred filters in FASTA
[TXT]jp_HpR_w4K.full_MSA.fasta.noGaps.html2015-04-17 19:44 3.0MFull MSA before JPred filters in FASTA
[TXT]jp_HpR_w4K.full_MSA.fasta.withGaps.html2015-04-17 19:44 43MFull MSA before JPred filters in FASTA
[ ]jp_HpR_w4K.hmm2015-04-17 19:43 15KHHMer2 profile of the alignment
[TXT]jp_HpR_w4K.html2015-04-17 19:43 207KHTML prediction and alignment data
[ ]jp_HpR_w4K.input2015-04-17 18:03 87 Raw input data for analysis
[ ]jp_HpR_w4K.jalview2015-04-17 19:43 2.4KJalview annotation file for alignment
[ ]jp_HpR_w4K.jnet2015-04-17 19:43 3.0KJnet secondary structure output
[TXT]jp_HpR_w4K.profile2015-04-17 19:41 13KPSIBLAST profile from alignment
[ ]jp_HpR_w4K.pssm2015-04-17 19:43 17KPSIBLAST PSSM for Jnet
[TXT]jp_HpR_w4K.results.html2016-02-15 12:19 42KJPred results page
[TXT]jp_HpR_w4K.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_HpR_w4K.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_HpR_w4K.seq2015-04-17 18:03 94 Sequence data file
[TXT]jp_HpR_w4K.simple.html2015-04-17 19:43 1.2KBrief HTML: sequence and prediction only
[TXT]jp_HpR_w4K.svg.html2015-04-17 19:44 34KJalview SVG summary of results
[ ]jp_HpR_w4K.tar.gz2015-04-17 19:44 9.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.