JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:39 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2aefa2.name2015-04-17 19:16 0 Job name flag file
[ ]jp_WwWt2zt.align2015-04-17 22:38 106KPSIBLAST alignment in FASTA format
[TXT]jp_WwWt2zt.als2015-04-17 22:39 2.3KAlscript command file for PS/PDF output
[ ]jp_WwWt2zt.blast.gz2015-04-17 22:37 3.4MCompressed PSIBLAST output file
[TXT]jp_WwWt2zt.coils.csv2015-04-17 22:39 582 COILS output in CSV format
[ ]jp_WwWt2zt.coilseq.lupas_142015-04-17 22:39 3.9KCOILS output, window length 14
[ ]jp_WwWt2zt.coilseq.lupas_212015-04-17 22:39 3.9KCOILS output, window length 21
[ ]jp_WwWt2zt.coilseq.lupas_282015-04-17 22:39 3.9KCOILS output, window length 28
[ ]jp_WwWt2zt.concise2015-04-17 22:39 203KPrediction: coiled-coil, solvent, alignment
[ ]jp_WwWt2zt.concise.blc2015-04-17 22:39 105KBLC format prediction and alignment data
[ ]jp_WwWt2zt.concise.fasta2015-04-17 22:39 107KPrediction: coiled-coil, solvent, alignment
[ ]jp_WwWt2zt.concise.pdf2015-04-17 22:39 675KPDF prediction and alignment data
[ ]jp_WwWt2zt.concise.ps2015-04-17 22:39 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_WwWt2zt.fasta2015-04-17 21:43 106 Input query sequence in FASTA format
[ ]jp_WwWt2zt.full_MSA.fasta2015-04-17 22:38 9.2MFull MSA before JPred filters in FASTA
[TXT]jp_WwWt2zt.full_MSA.fasta.noGaps.html2015-04-17 22:39 2.4MFull MSA before JPred filters in FASTA
[TXT]jp_WwWt2zt.full_MSA.fasta.withGaps.html2015-04-17 22:39 33MFull MSA before JPred filters in FASTA
[ ]jp_WwWt2zt.hmm2015-04-17 22:39 17KHHMer2 profile of the alignment
[TXT]jp_WwWt2zt.html2015-04-17 22:39 300KHTML prediction and alignment data
[ ]jp_WwWt2zt.input2015-04-17 19:16 99 Raw input data for analysis
[ ]jp_WwWt2zt.jalview2015-04-17 22:39 2.7KJalview annotation file for alignment
[ ]jp_WwWt2zt.jnet2015-04-17 22:39 3.4KJnet secondary structure output
[TXT]jp_WwWt2zt.profile2015-04-17 22:20 15KPSIBLAST profile from alignment
[ ]jp_WwWt2zt.pssm2015-04-17 22:38 20KPSIBLAST PSSM for Jnet
[TXT]jp_WwWt2zt.results.html2016-02-15 12:19 48KJPred results page
[TXT]jp_WwWt2zt.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_WwWt2zt.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_WwWt2zt.seq2015-04-17 19:16 106 Sequence data file
[TXT]jp_WwWt2zt.simple.html2015-04-17 22:39 1.2KBrief HTML: sequence and prediction only
[TXT]jp_WwWt2zt.svg.html2015-04-17 22:39 39KJalview SVG summary of results
[ ]jp_WwWt2zt.tar.gz2015-04-17 22:39 7.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.