JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:46 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2ag4a_.name2015-04-17 19:16 0 Job name flag file
[ ]jp_Kuu0M4X.align2015-04-17 21:46 81KPSIBLAST alignment in FASTA format
[TXT]jp_Kuu0M4X.als2015-04-17 21:46 2.6KAlscript command file for PS/PDF output
[ ]jp_Kuu0M4X.blast.gz2015-04-17 21:46 191KCompressed PSIBLAST output file
[TXT]jp_Kuu0M4X.coils.csv2015-04-17 21:46 1.0KCOILS output in CSV format
[ ]jp_Kuu0M4X.coilseq.lupas_142015-04-17 21:46 6.9KCOILS output, window length 14
[ ]jp_Kuu0M4X.coilseq.lupas_212015-04-17 21:46 6.9KCOILS output, window length 21
[ ]jp_Kuu0M4X.coilseq.lupas_282015-04-17 21:46 6.9KCOILS output, window length 28
[ ]jp_Kuu0M4X.concise2015-04-17 21:46 162KPrediction: coiled-coil, solvent, alignment
[ ]jp_Kuu0M4X.concise.blc2015-04-17 21:46 82KBLC format prediction and alignment data
[ ]jp_Kuu0M4X.concise.fasta2015-04-17 21:46 83KPrediction: coiled-coil, solvent, alignment
[ ]jp_Kuu0M4X.concise.pdf2015-04-17 21:46 556KPDF prediction and alignment data
[ ]jp_Kuu0M4X.concise.ps2015-04-17 21:46 9.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_Kuu0M4X.fasta2015-04-17 21:43 179 Input query sequence in FASTA format
[ ]jp_Kuu0M4X.full_MSA.fasta2015-04-17 21:46 399KFull MSA before JPred filters in FASTA
[TXT]jp_Kuu0M4X.full_MSA.fasta.noGaps.html2015-04-17 21:46 176KFull MSA before JPred filters in FASTA
[TXT]jp_Kuu0M4X.full_MSA.fasta.withGaps.html2015-04-17 21:46 2.0MFull MSA before JPred filters in FASTA
[ ]jp_Kuu0M4X.hmm2015-04-17 21:46 31KHHMer2 profile of the alignment
[TXT]jp_Kuu0M4X.html2015-04-17 21:46 182KHTML prediction and alignment data
[ ]jp_Kuu0M4X.input2015-04-17 19:16 171 Raw input data for analysis
[ ]jp_Kuu0M4X.jalview2015-04-17 21:46 4.1KJalview annotation file for alignment
[ ]jp_Kuu0M4X.jnet2015-04-17 21:46 6.0KJnet secondary structure output
[TXT]jp_Kuu0M4X.profile2015-04-17 21:45 26KPSIBLAST profile from alignment
[ ]jp_Kuu0M4X.pssm2015-04-17 21:46 35KPSIBLAST PSSM for Jnet
[TXT]jp_Kuu0M4X.results.html2016-02-15 12:19 73KJPred results page
[TXT]jp_Kuu0M4X.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Kuu0M4X.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Kuu0M4X.seq2015-04-17 19:16 179 Sequence data file
[TXT]jp_Kuu0M4X.simple.html2015-04-17 21:46 1.4KBrief HTML: sequence and prediction only
[TXT]jp_Kuu0M4X.svg.html2015-04-17 21:46 65KJalview SVG summary of results
[ ]jp_Kuu0M4X.tar.gz2015-04-17 21:46 1.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.