JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_K6SIjhE.als2015-04-17 21:51 2.1KAlscript command file for PS/PDF output
[ ]jp_K6SIjhE.tar.gz2015-04-17 21:51 245KArchive containing complete results
[ ]jp_K6SIjhE.concise.blc2015-04-17 21:51 18KBLC format prediction and alignment data
[TXT]jp_K6SIjhE.simple.html2015-04-17 21:51 1.2KBrief HTML: sequence and prediction only
[TXT]jp_K6SIjhE.coils.csv2015-04-17 21:51 618 COILS output in CSV format
[ ]jp_K6SIjhE.coilseq.lupas_142015-04-17 21:51 4.1KCOILS output, window length 14
[ ]jp_K6SIjhE.coilseq.lupas_212015-04-17 21:51 4.1KCOILS output, window length 21
[ ]jp_K6SIjhE.coilseq.lupas_282015-04-17 21:51 4.1KCOILS output, window length 28
[ ]jp_K6SIjhE.blast.gz2015-04-17 21:51 45KCompressed PSIBLAST output file
[ ]jp_K6SIjhE.full_MSA.fasta2015-04-17 21:51 43KFull MSA before JPred filters in FASTA
[TXT]jp_K6SIjhE.full_MSA.fasta.noGaps.html2015-04-17 21:51 59KFull MSA before JPred filters in FASTA
[TXT]jp_K6SIjhE.full_MSA.fasta.withGaps.html2015-04-17 21:51 250KFull MSA before JPred filters in FASTA
[ ]jp_K6SIjhE.hmm2015-04-17 21:51 18KHHMer2 profile of the alignment
[TXT]jp_K6SIjhE.html2015-04-17 21:51 55KHTML prediction and alignment data
[TXT]jp_K6SIjhE.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_K6SIjhE.fasta2015-04-17 21:43 112 Input query sequence in FASTA format
[TXT]jp_K6SIjhE.results.html2016-02-15 12:19 50KJPred results page
[TXT]LOG2015-04-17 21:51 4.7KJPred server log file
[TXT]jp_K6SIjhE.svg.html2015-04-17 21:51 42KJalview SVG summary of results
[ ]jp_K6SIjhE.jalview2015-04-17 21:51 2.8KJalview annotation file for alignment
[TXT]jp_K6SIjhE.results_jalview.html2016-02-24 17:18 13KJalview results options
[ ]jp_K6SIjhE.jnet2015-04-17 21:51 3.7KJnet secondary structure output
[TXT]d2aiba_.name2015-04-17 19:16 0 Job name flag file
[ ]jp_K6SIjhE.concise.pdf2015-04-17 21:51 111KPDF prediction and alignment data
[ ]jp_K6SIjhE.pssm2015-04-17 21:51 21KPSIBLAST PSSM for Jnet
[ ]jp_K6SIjhE.align2015-04-17 21:51 17KPSIBLAST alignment in FASTA format
[TXT]jp_K6SIjhE.profile2015-04-17 21:49 16KPSIBLAST profile from alignment
[ ]jp_K6SIjhE.concise2015-04-17 21:51 37KPrediction: coiled-coil, solvent, alignment
[ ]jp_K6SIjhE.concise.fasta2015-04-17 21:51 18KPrediction: coiled-coil, solvent, alignment
[ ]jp_K6SIjhE.concise.ps2015-04-17 21:51 2.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_K6SIjhE.input2015-04-17 19:16 105 Raw input data for analysis
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[ ]jp_K6SIjhE.seq2015-04-17 19:16 112 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.