JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2ayda_.name2015-04-17 18:39 0 Job name flag file
[ ]jp_eTrO9pU.align2015-04-17 20:43 43KPSIBLAST alignment in FASTA format
[TXT]jp_eTrO9pU.als2015-04-17 20:43 2.1KAlscript command file for PS/PDF output
[ ]jp_eTrO9pU.blast.gz2015-04-17 20:42 1.4MCompressed PSIBLAST output file
[TXT]jp_eTrO9pU.coils.csv2015-04-17 20:43 486 COILS output in CSV format
[ ]jp_eTrO9pU.coilseq.lupas_142015-04-17 20:43 3.2KCOILS output, window length 14
[ ]jp_eTrO9pU.coilseq.lupas_212015-04-17 20:43 3.2KCOILS output, window length 21
[ ]jp_eTrO9pU.coilseq.lupas_282015-04-17 20:43 3.2KCOILS output, window length 28
[ ]jp_eTrO9pU.concise2015-04-17 20:43 83KPrediction: coiled-coil, solvent, alignment
[ ]jp_eTrO9pU.concise.blc2015-04-17 20:43 43KBLC format prediction and alignment data
[ ]jp_eTrO9pU.concise.fasta2015-04-17 20:43 44KPrediction: coiled-coil, solvent, alignment
[ ]jp_eTrO9pU.concise.pdf2015-04-17 20:43 228KPDF prediction and alignment data
[ ]jp_eTrO9pU.concise.ps2015-04-17 20:43 4.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_eTrO9pU.fasta2015-04-17 20:38 90 Input query sequence in FASTA format
[ ]jp_eTrO9pU.full_MSA.fasta2015-04-17 20:43 2.5MFull MSA before JPred filters in FASTA
[TXT]jp_eTrO9pU.full_MSA.fasta.noGaps.html2015-04-17 20:43 805KFull MSA before JPred filters in FASTA
[TXT]jp_eTrO9pU.full_MSA.fasta.withGaps.html2015-04-17 20:43 8.9MFull MSA before JPred filters in FASTA
[ ]jp_eTrO9pU.hmm2015-04-17 20:43 14KHHMer2 profile of the alignment
[TXT]jp_eTrO9pU.html2015-04-17 20:43 138KHTML prediction and alignment data
[ ]jp_eTrO9pU.input2015-04-17 18:39 83 Raw input data for analysis
[ ]jp_eTrO9pU.jalview2015-04-17 20:43 2.3KJalview annotation file for alignment
[ ]jp_eTrO9pU.jnet2015-04-17 20:43 2.9KJnet secondary structure output
[TXT]jp_eTrO9pU.profile2015-04-17 20:42 13KPSIBLAST profile from alignment
[ ]jp_eTrO9pU.pssm2015-04-17 20:43 16KPSIBLAST PSSM for Jnet
[TXT]jp_eTrO9pU.results.html2016-02-15 12:19 41KJPred results page
[TXT]jp_eTrO9pU.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_eTrO9pU.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_eTrO9pU.seq2015-04-17 18:39 90 Sequence data file
[TXT]jp_eTrO9pU.simple.html2015-04-17 20:43 1.2KBrief HTML: sequence and prediction only
[TXT]jp_eTrO9pU.svg.html2015-04-17 20:43 33KJalview SVG summary of results
[ ]jp_eTrO9pU.tar.gz2015-04-17 20:43 2.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.