JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2bl8a1.name2015-04-17 16:15 0 Job name flag file
[ ]jp_EH6qO9v.align2015-04-17 16:43 6.4KPSIBLAST alignment in FASTA format
[TXT]jp_EH6qO9v.als2015-04-17 16:43 2.0KAlscript command file for PS/PDF output
[ ]jp_EH6qO9v.blast.gz2015-04-17 16:43 13KCompressed PSIBLAST output file
[TXT]jp_EH6qO9v.coils.csv2015-04-17 16:43 588 COILS output in CSV format
[ ]jp_EH6qO9v.coilseq.lupas_142015-04-17 16:43 3.9KCOILS output, window length 14
[ ]jp_EH6qO9v.coilseq.lupas_212015-04-17 16:43 3.9KCOILS output, window length 21
[ ]jp_EH6qO9v.coilseq.lupas_282015-04-17 16:43 3.9KCOILS output, window length 28
[ ]jp_EH6qO9v.concise2015-04-17 16:43 16KPrediction: coiled-coil, solvent, alignment
[ ]jp_EH6qO9v.concise.blc2015-04-17 16:43 7.8KBLC format prediction and alignment data
[ ]jp_EH6qO9v.concise.fasta2015-04-17 16:43 7.4KPrediction: coiled-coil, solvent, alignment
[ ]jp_EH6qO9v.concise.pdf2015-04-17 16:43 51KPDF prediction and alignment data
[ ]jp_EH6qO9v.concise.ps2015-04-17 16:43 898KPrediction: coiled-coil, solvent, alignment
[ ]jp_EH6qO9v.fasta2015-04-17 16:41 107 Input query sequence in FASTA format
[ ]jp_EH6qO9v.full_MSA.fasta2015-04-17 16:43 12KFull MSA before JPred filters in FASTA
[TXT]jp_EH6qO9v.full_MSA.fasta.noGaps.html2015-04-17 16:43 17KFull MSA before JPred filters in FASTA
[TXT]jp_EH6qO9v.full_MSA.fasta.withGaps.html2015-04-17 16:43 46KFull MSA before JPred filters in FASTA
[ ]jp_EH6qO9v.hmm2015-04-17 16:43 17KHHMer2 profile of the alignment
[TXT]jp_EH6qO9v.html2015-04-17 16:43 28KHTML prediction and alignment data
[ ]jp_EH6qO9v.input2015-04-17 16:15 100 Raw input data for analysis
[ ]jp_EH6qO9v.jalview2015-04-17 16:43 2.7KJalview annotation file for alignment
[ ]jp_EH6qO9v.jnet2015-04-17 16:43 3.5KJnet secondary structure output
[TXT]jp_EH6qO9v.profile2015-04-17 16:42 15KPSIBLAST profile from alignment
[ ]jp_EH6qO9v.pssm2015-04-17 16:43 20KPSIBLAST PSSM for Jnet
[TXT]jp_EH6qO9v.results.html2016-02-15 12:19 48KJPred results page
[TXT]jp_EH6qO9v.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_EH6qO9v.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_EH6qO9v.seq2015-04-17 16:15 107 Sequence data file
[TXT]jp_EH6qO9v.simple.html2015-04-17 16:43 1.2KBrief HTML: sequence and prediction only
[TXT]jp_EH6qO9v.svg.html2015-04-17 16:43 39KJalview SVG summary of results
[ ]jp_EH6qO9v.tar.gz2015-04-17 16:43 108KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.