JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:44 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2btia_.name2015-04-17 16:49 0 Job name flag file
[ ]jp_SYcwqKA.align2015-04-17 17:44 57KPSIBLAST alignment in FASTA format
[TXT]jp_SYcwqKA.als2015-04-17 17:44 2.0KAlscript command file for PS/PDF output
[ ]jp_SYcwqKA.blast.gz2015-04-17 17:43 228KCompressed PSIBLAST output file
[TXT]jp_SYcwqKA.coils.csv2015-04-17 17:44 378 COILS output in CSV format
[ ]jp_SYcwqKA.coilseq.lupas_142015-04-17 17:44 2.4KCOILS output, window length 14
[ ]jp_SYcwqKA.coilseq.lupas_212015-04-17 17:44 2.4KCOILS output, window length 21
[ ]jp_SYcwqKA.coilseq.lupas_282015-04-17 17:44 2.4KCOILS output, window length 28
[ ]jp_SYcwqKA.concise2015-04-17 17:44 108KPrediction: coiled-coil, solvent, alignment
[ ]jp_SYcwqKA.concise.blc2015-04-17 17:44 58KBLC format prediction and alignment data
[ ]jp_SYcwqKA.concise.fasta2015-04-17 17:44 58KPrediction: coiled-coil, solvent, alignment
[ ]jp_SYcwqKA.concise.pdf2015-04-17 17:44 338KPDF prediction and alignment data
[ ]jp_SYcwqKA.concise.ps2015-04-17 17:44 5.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_SYcwqKA.fasta2015-04-17 17:40 71 Input query sequence in FASTA format
[ ]jp_SYcwqKA.full_MSA.fasta2015-04-17 17:43 306KFull MSA before JPred filters in FASTA
[TXT]jp_SYcwqKA.full_MSA.fasta.noGaps.html2015-04-17 17:44 267KFull MSA before JPred filters in FASTA
[TXT]jp_SYcwqKA.full_MSA.fasta.withGaps.html2015-04-17 17:44 1.3MFull MSA before JPred filters in FASTA
[ ]jp_SYcwqKA.hmm2015-04-17 17:44 11KHHMer2 profile of the alignment
[TXT]jp_SYcwqKA.html2015-04-17 17:44 210KHTML prediction and alignment data
[ ]jp_SYcwqKA.input2015-04-17 16:49 65 Raw input data for analysis
[ ]jp_SYcwqKA.jalview2015-04-17 17:44 2.0KJalview annotation file for alignment
[ ]jp_SYcwqKA.jnet2015-04-17 17:44 2.2KJnet secondary structure output
[TXT]jp_SYcwqKA.profile2015-04-17 17:43 9.7KPSIBLAST profile from alignment
[ ]jp_SYcwqKA.pssm2015-04-17 17:44 12KPSIBLAST PSSM for Jnet
[TXT]jp_SYcwqKA.results.html2016-02-15 12:19 34KJPred results page
[TXT]jp_SYcwqKA.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_SYcwqKA.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_SYcwqKA.seq2015-04-17 16:49 71 Sequence data file
[TXT]jp_SYcwqKA.simple.html2015-04-17 17:44 1.1KBrief HTML: sequence and prediction only
[TXT]jp_SYcwqKA.svg.html2015-04-17 17:44 26KJalview SVG summary of results
[ ]jp_SYcwqKA.tar.gz2015-04-17 17:44 771KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.