JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:31 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2bw3a1.name2015-04-17 16:15 0 Job name flag file
[ ]jp_qlnqOGW.align2015-04-17 17:30 15KPSIBLAST alignment in FASTA format
[TXT]jp_qlnqOGW.als2015-04-17 17:30 1.6KAlscript command file for PS/PDF output
[ ]jp_qlnqOGW.blast.gz2015-04-17 17:30 23KCompressed PSIBLAST output file
[TXT]jp_qlnqOGW.coils.csv2015-04-17 17:30 534 COILS output in CSV format
[ ]jp_qlnqOGW.coilseq.lupas_142015-04-17 17:30 3.5KCOILS output, window length 14
[ ]jp_qlnqOGW.coilseq.lupas_212015-04-17 17:30 3.5KCOILS output, window length 21
[ ]jp_qlnqOGW.coilseq.lupas_282015-04-17 17:30 3.5KCOILS output, window length 28
[ ]jp_qlnqOGW.concise2015-04-17 17:30 32KPrediction: coiled-coil, solvent, alignment
[ ]jp_qlnqOGW.concise.blc2015-04-17 17:30 16KBLC format prediction and alignment data
[ ]jp_qlnqOGW.concise.fasta2015-04-17 17:30 16KPrediction: coiled-coil, solvent, alignment
[ ]jp_qlnqOGW.concise.pdf2015-04-17 17:30 97KPDF prediction and alignment data
[ ]jp_qlnqOGW.concise.ps2015-04-17 17:30 1.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_qlnqOGW.fasta2015-04-17 16:41 98 Input query sequence in FASTA format
[ ]jp_qlnqOGW.full_MSA.fasta2015-04-17 17:30 42KFull MSA before JPred filters in FASTA
[TXT]jp_qlnqOGW.full_MSA.fasta.noGaps.html2015-04-17 17:30 58KFull MSA before JPred filters in FASTA
[TXT]jp_qlnqOGW.full_MSA.fasta.withGaps.html2015-04-17 17:30 201KFull MSA before JPred filters in FASTA
[ ]jp_qlnqOGW.hmm2015-04-17 17:30 16KHHMer2 profile of the alignment
[TXT]jp_qlnqOGW.html2015-04-17 17:30 53KHTML prediction and alignment data
[ ]jp_qlnqOGW.input2015-04-17 16:15 91 Raw input data for analysis
[ ]jp_qlnqOGW.jalview2015-04-17 17:30 2.5KJalview annotation file for alignment
[ ]jp_qlnqOGW.jnet2015-04-17 17:30 3.1KJnet secondary structure output
[TXT]jp_qlnqOGW.profile2015-04-17 17:16 14KPSIBLAST profile from alignment
[ ]jp_qlnqOGW.pssm2015-04-17 17:30 18KPSIBLAST PSSM for Jnet
[TXT]jp_qlnqOGW.results.html2016-02-15 12:19 42KJPred results page
[TXT]jp_qlnqOGW.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_qlnqOGW.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_qlnqOGW.seq2015-04-17 16:15 98 Sequence data file
[TXT]jp_qlnqOGW.simple.html2015-04-17 17:30 1.1KBrief HTML: sequence and prediction only
[TXT]jp_qlnqOGW.svg.html2015-04-17 17:31 34KJalview SVG summary of results
[ ]jp_qlnqOGW.tar.gz2015-04-17 17:31 195KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.