A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:47 | 4.7K | JPred server log file |
| README | 2016-02-15 12:19 | 2.1K | Results file descriptions |
| d2bz1a_.name | 2015-04-17 18:40 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_qHRYzbu.align | 2015-04-17 20:46 | 129K | PSIBLAST alignment in FASTA format |
| jp_qHRYzbu.als | 2015-04-17 20:46 | 3.0K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_qHRYzbu.blast.gz | 2015-04-17 20:45 | 3.8M | Compressed PSIBLAST output file |
| jp_qHRYzbu.coils.csv | 2015-04-17 20:46 | 1.0K | COILS output in CSV format |
| jp_qHRYzbu.coilseq.lupas_14 | 2015-04-17 20:46 | 7.3K | COILS output, window length 14 |
| jp_qHRYzbu.coilseq.lupas_21 | 2015-04-17 20:46 | 7.3K | COILS output, window length 21 |
| jp_qHRYzbu.coilseq.lupas_28 | 2015-04-17 20:46 | 7.3K | COILS output, window length 28 |
| jp_qHRYzbu.concise | 2015-04-17 20:46 | 254K | Prediction: coiled-coil, solvent, alignment |
| jp_qHRYzbu.concise.blc | 2015-04-17 20:46 | 129K | BLC format prediction and alignment data |
| jp_qHRYzbu.concise.fasta | 2015-04-17 20:46 | 130K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_qHRYzbu.concise.pdf | 2015-04-17 20:46 | 892K | PDF prediction and alignment data |
| jp_qHRYzbu.concise.ps | 2015-04-17 20:46 | 16M | Prediction: coiled-coil, solvent, alignment |
| jp_qHRYzbu.fasta | 2015-04-17 20:40 | 188 | Input query sequence in FASTA format |
| jp_qHRYzbu.full_MSA.fasta | 2015-04-17 20:45 | 7.0M | Full MSA before JPred filters in FASTA |
| jp_qHRYzbu.full_MSA.fasta.noGaps.html | 2015-04-17 20:46 | 1.3M | Full MSA before JPred filters in FASTA |
| jp_qHRYzbu.full_MSA.fasta.withGaps.html | 2015-04-17 20:46 | 23M | Full MSA before JPred filters in FASTA |
| jp_qHRYzbu.hmm | 2015-04-17 20:46 | 32K | HHMer2 profile of the alignment |
| jp_qHRYzbu.html | 2015-04-17 20:46 | 274K | HTML prediction and alignment data |
| jp_qHRYzbu.input | 2015-04-17 18:40 | 180 | Raw input data for analysis |
| jp_qHRYzbu.jalview | 2015-04-17 20:46 | 4.3K | Jalview annotation file for alignment |
| jp_qHRYzbu.jnet | 2015-04-17 20:46 | 6.4K | Jnet secondary structure output |
| jp_qHRYzbu.profile | 2015-04-17 20:43 | 28K | PSIBLAST profile from alignment |
| jp_qHRYzbu.pssm | 2015-04-17 20:46 | 37K | PSIBLAST PSSM for Jnet |
| jp_qHRYzbu.results.html | 2016-02-15 12:19 | 78K | JPred results page |
| jp_qHRYzbu.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_qHRYzbu.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_qHRYzbu.seq | 2015-04-17 18:40 | 188 | Sequence data file |
| jp_qHRYzbu.simple.html | 2015-04-17 20:46 | 1.5K | Brief HTML: sequence and prediction only |
![[TXT]](jp_qHRYzbu.svg.html) | jp_qHRYzbu.svg.html | 2015-04-17 20:47 | 70K | Jalview SVG summary of results |
| jp_qHRYzbu.tar.gz | 2015-04-17 20:47 | 6.8M | Archive containing complete results |
