JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:16 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2c2aa1.name2015-04-17 19:18 0 Job name flag file
[ ]jp_u6XxBKd.align2015-04-17 22:16 87KPSIBLAST alignment in FASTA format
[TXT]jp_u6XxBKd.als2015-04-17 22:16 1.6KAlscript command file for PS/PDF output
[ ]jp_u6XxBKd.blast.gz2015-04-17 22:14 5.2MCompressed PSIBLAST output file
[TXT]jp_u6XxBKd.coils.csv2015-04-17 22:16 564 COILS output in CSV format
[ ]jp_u6XxBKd.coilseq.lupas_142015-04-17 22:16 3.7KCOILS output, window length 14
[ ]jp_u6XxBKd.coilseq.lupas_212015-04-17 22:16 3.7KCOILS output, window length 21
[ ]jp_u6XxBKd.coilseq.lupas_282015-04-17 22:16 3.7KCOILS output, window length 28
[ ]jp_u6XxBKd.concise2015-04-17 22:16 168KPrediction: coiled-coil, solvent, alignment
[ ]jp_u6XxBKd.concise.blc2015-04-17 22:16 87KBLC format prediction and alignment data
[ ]jp_u6XxBKd.concise.fasta2015-04-17 22:16 88KPrediction: coiled-coil, solvent, alignment
[ ]jp_u6XxBKd.concise.pdf2015-04-17 22:16 524KPDF prediction and alignment data
[ ]jp_u6XxBKd.concise.ps2015-04-17 22:16 9.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_u6XxBKd.fasta2015-04-17 21:45 103 Input query sequence in FASTA format
[ ]jp_u6XxBKd.full_MSA.fasta2015-04-17 22:15 6.7MFull MSA before JPred filters in FASTA
[TXT]jp_u6XxBKd.full_MSA.fasta.noGaps.html2015-04-17 22:16 2.2MFull MSA before JPred filters in FASTA
[TXT]jp_u6XxBKd.full_MSA.fasta.withGaps.html2015-04-17 22:16 20MFull MSA before JPred filters in FASTA
[ ]jp_u6XxBKd.hmm2015-04-17 22:16 17KHHMer2 profile of the alignment
[TXT]jp_u6XxBKd.html2015-04-17 22:16 256KHTML prediction and alignment data
[ ]jp_u6XxBKd.input2015-04-17 19:18 96 Raw input data for analysis
[ ]jp_u6XxBKd.jalview2015-04-17 22:16 2.7KJalview annotation file for alignment
[ ]jp_u6XxBKd.jnet2015-04-17 22:16 3.3KJnet secondary structure output
[TXT]jp_u6XxBKd.profile2015-04-17 22:11 15KPSIBLAST profile from alignment
[ ]jp_u6XxBKd.pssm2015-04-17 22:16 19KPSIBLAST PSSM for Jnet
[TXT]jp_u6XxBKd.results.html2016-02-15 12:19 44KJPred results page
[TXT]jp_u6XxBKd.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_u6XxBKd.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_u6XxBKd.seq2015-04-17 19:18 103 Sequence data file
[TXT]jp_u6XxBKd.simple.html2015-04-17 22:16 1.1KBrief HTML: sequence and prediction only
[TXT]jp_u6XxBKd.svg.html2015-04-17 22:16 36KJalview SVG summary of results
[ ]jp_u6XxBKd.tar.gz2015-04-17 22:16 8.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.