JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_HLWvaUj.als2015-04-17 18:41 2.2KAlscript command file for PS/PDF output
[ ]jp_HLWvaUj.tar.gz2015-04-17 18:41 345KArchive containing complete results
[ ]jp_HLWvaUj.concise.blc2015-04-17 18:41 24KBLC format prediction and alignment data
[TXT]jp_HLWvaUj.simple.html2015-04-17 18:41 1.2KBrief HTML: sequence and prediction only
[TXT]jp_HLWvaUj.coils.csv2015-04-17 18:41 510 COILS output in CSV format
[ ]jp_HLWvaUj.coilseq.lupas_142015-04-17 18:41 3.4KCOILS output, window length 14
[ ]jp_HLWvaUj.coilseq.lupas_212015-04-17 18:41 3.4KCOILS output, window length 21
[ ]jp_HLWvaUj.coilseq.lupas_282015-04-17 18:41 3.4KCOILS output, window length 28
[ ]jp_HLWvaUj.blast.gz2015-04-17 18:41 74KCompressed PSIBLAST output file
[ ]jp_HLWvaUj.full_MSA.fasta2015-04-17 18:41 218KFull MSA before JPred filters in FASTA
[TXT]jp_HLWvaUj.full_MSA.fasta.noGaps.html2015-04-17 18:41 128KFull MSA before JPred filters in FASTA
[TXT]jp_HLWvaUj.full_MSA.fasta.withGaps.html2015-04-17 18:41 922KFull MSA before JPred filters in FASTA
[ ]jp_HLWvaUj.hmm2015-04-17 18:41 15KHHMer2 profile of the alignment
[TXT]jp_HLWvaUj.html2015-04-17 18:41 79KHTML prediction and alignment data
[TXT]jp_HLWvaUj.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_HLWvaUj.fasta2015-04-17 18:39 94 Input query sequence in FASTA format
[TXT]jp_HLWvaUj.results.html2016-02-15 12:19 43KJPred results page
[TXT]LOG2015-04-17 18:41 4.7KJPred server log file
[TXT]jp_HLWvaUj.svg.html2015-04-17 18:41 35KJalview SVG summary of results
[ ]jp_HLWvaUj.jalview2015-04-17 18:41 2.4KJalview annotation file for alignment
[TXT]jp_HLWvaUj.results_jalview.html2016-02-24 17:18 13KJalview results options
[ ]jp_HLWvaUj.jnet2015-04-17 18:41 3.0KJnet secondary structure output
[TXT]d2c60a1.name2015-04-17 17:27 0 Job name flag file
[ ]jp_HLWvaUj.concise.pdf2015-04-17 18:41 147KPDF prediction and alignment data
[ ]jp_HLWvaUj.pssm2015-04-17 18:41 17KPSIBLAST PSSM for Jnet
[ ]jp_HLWvaUj.align2015-04-17 18:41 24KPSIBLAST alignment in FASTA format
[TXT]jp_HLWvaUj.profile2015-04-17 18:40 13KPSIBLAST profile from alignment
[ ]jp_HLWvaUj.concise2015-04-17 18:41 47KPrediction: coiled-coil, solvent, alignment
[ ]jp_HLWvaUj.concise.fasta2015-04-17 18:41 24KPrediction: coiled-coil, solvent, alignment
[ ]jp_HLWvaUj.concise.ps2015-04-17 18:41 2.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_HLWvaUj.input2015-04-17 17:27 87 Raw input data for analysis
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[ ]jp_HLWvaUj.seq2015-04-17 17:27 94 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.