JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:57 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2c78a2.name2015-04-17 17:33 0 Job name flag file
[ ]jp_S2KETWg.align2015-04-17 18:57 45KPSIBLAST alignment in FASTA format
[TXT]jp_S2KETWg.als2015-04-17 18:57 2.2KAlscript command file for PS/PDF output
[ ]jp_S2KETWg.blast.gz2015-04-17 18:56 929KCompressed PSIBLAST output file
[TXT]jp_S2KETWg.coils.csv2015-04-17 18:57 588 COILS output in CSV format
[ ]jp_S2KETWg.coilseq.lupas_142015-04-17 18:57 3.9KCOILS output, window length 14
[ ]jp_S2KETWg.coilseq.lupas_212015-04-17 18:57 3.9KCOILS output, window length 21
[ ]jp_S2KETWg.coilseq.lupas_282015-04-17 18:57 3.9KCOILS output, window length 28
[ ]jp_S2KETWg.concise2015-04-17 18:57 89KPrediction: coiled-coil, solvent, alignment
[ ]jp_S2KETWg.concise.blc2015-04-17 18:57 46KBLC format prediction and alignment data
[ ]jp_S2KETWg.concise.fasta2015-04-17 18:57 46KPrediction: coiled-coil, solvent, alignment
[ ]jp_S2KETWg.concise.pdf2015-04-17 18:57 283KPDF prediction and alignment data
[ ]jp_S2KETWg.concise.ps2015-04-17 18:57 5.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_S2KETWg.fasta2015-04-17 18:50 107 Input query sequence in FASTA format
[ ]jp_S2KETWg.full_MSA.fasta2015-04-17 18:56 1.7MFull MSA before JPred filters in FASTA
[TXT]jp_S2KETWg.full_MSA.fasta.noGaps.html2015-04-17 18:57 570KFull MSA before JPred filters in FASTA
[TXT]jp_S2KETWg.full_MSA.fasta.withGaps.html2015-04-17 18:57 5.2MFull MSA before JPred filters in FASTA
[ ]jp_S2KETWg.hmm2015-04-17 18:57 17KHHMer2 profile of the alignment
[TXT]jp_S2KETWg.html2015-04-17 18:57 134KHTML prediction and alignment data
[ ]jp_S2KETWg.input2015-04-17 17:33 100 Raw input data for analysis
[ ]jp_S2KETWg.jalview2015-04-17 18:57 2.7KJalview annotation file for alignment
[ ]jp_S2KETWg.jnet2015-04-17 18:57 3.5KJnet secondary structure output
[TXT]jp_S2KETWg.profile2015-04-17 18:54 15KPSIBLAST profile from alignment
[ ]jp_S2KETWg.pssm2015-04-17 18:57 20KPSIBLAST PSSM for Jnet
[TXT]jp_S2KETWg.results.html2016-02-15 12:19 47KJPred results page
[TXT]jp_S2KETWg.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_S2KETWg.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_S2KETWg.seq2015-04-17 17:33 107 Sequence data file
[TXT]jp_S2KETWg.simple.html2015-04-17 18:57 1.2KBrief HTML: sequence and prediction only
[TXT]jp_S2KETWg.svg.html2015-04-17 18:57 39KJalview SVG summary of results
[ ]jp_S2KETWg.tar.gz2015-04-17 18:57 1.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.