JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:45 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2cvea2.name2015-04-17 18:40 0 Job name flag file
[ ]jp_CD7un2D.align2015-04-17 20:44 8.7KPSIBLAST alignment in FASTA format
[TXT]jp_CD7un2D.als2015-04-17 20:44 2.1KAlscript command file for PS/PDF output
[ ]jp_CD7un2D.blast.gz2015-04-17 20:44 13KCompressed PSIBLAST output file
[TXT]jp_CD7un2D.coils.csv2015-04-17 20:44 432 COILS output in CSV format
[ ]jp_CD7un2D.coilseq.lupas_142015-04-17 20:44 2.8KCOILS output, window length 14
[ ]jp_CD7un2D.coilseq.lupas_212015-04-17 20:44 2.8KCOILS output, window length 21
[ ]jp_CD7un2D.coilseq.lupas_282015-04-17 20:44 2.8KCOILS output, window length 28
[ ]jp_CD7un2D.concise2015-04-17 20:44 19KPrediction: coiled-coil, solvent, alignment
[ ]jp_CD7un2D.concise.blc2015-04-17 20:44 9.6KBLC format prediction and alignment data
[ ]jp_CD7un2D.concise.fasta2015-04-17 20:44 9.4KPrediction: coiled-coil, solvent, alignment
[ ]jp_CD7un2D.concise.pdf2015-04-17 20:45 65KPDF prediction and alignment data
[ ]jp_CD7un2D.concise.ps2015-04-17 20:44 1.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_CD7un2D.fasta2015-04-17 20:40 80 Input query sequence in FASTA format
[ ]jp_CD7un2D.full_MSA.fasta2015-04-17 20:44 17KFull MSA before JPred filters in FASTA
[TXT]jp_CD7un2D.full_MSA.fasta.noGaps.html2015-04-17 20:45 27KFull MSA before JPred filters in FASTA
[TXT]jp_CD7un2D.full_MSA.fasta.withGaps.html2015-04-17 20:45 99KFull MSA before JPred filters in FASTA
[ ]jp_CD7un2D.hmm2015-04-17 20:44 13KHHMer2 profile of the alignment
[TXT]jp_CD7un2D.html2015-04-17 20:44 37KHTML prediction and alignment data
[ ]jp_CD7un2D.input2015-04-17 18:40 74 Raw input data for analysis
[ ]jp_CD7un2D.jalview2015-04-17 20:44 2.2KJalview annotation file for alignment
[ ]jp_CD7un2D.jnet2015-04-17 20:44 2.5KJnet secondary structure output
[TXT]jp_CD7un2D.profile2015-04-17 20:42 11KPSIBLAST profile from alignment
[ ]jp_CD7un2D.pssm2015-04-17 20:44 14KPSIBLAST PSSM for Jnet
[TXT]jp_CD7un2D.results.html2016-02-15 12:19 39KJPred results page
[TXT]jp_CD7un2D.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_CD7un2D.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_CD7un2D.seq2015-04-17 18:40 80 Sequence data file
[TXT]jp_CD7un2D.simple.html2015-04-17 20:44 1.1KBrief HTML: sequence and prediction only
[TXT]jp_CD7un2D.svg.html2015-04-17 20:45 31KJalview SVG summary of results
[ ]jp_CD7un2D.tar.gz2015-04-17 20:45 132KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.