JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:50 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2d9ra1.name2015-04-17 15:37 0 Job name flag file
[ ]jp_RwQpHRY.align2015-04-17 15:49 60KPSIBLAST alignment in FASTA format
[TXT]jp_RwQpHRY.als2015-04-17 15:49 2.4KAlscript command file for PS/PDF output
[ ]jp_RwQpHRY.blast.gz2015-04-17 15:49 137KCompressed PSIBLAST output file
[TXT]jp_RwQpHRY.coils.csv2015-04-17 15:49 540 COILS output in CSV format
[ ]jp_RwQpHRY.coilseq.lupas_142015-04-17 15:49 3.6KCOILS output, window length 14
[ ]jp_RwQpHRY.coilseq.lupas_212015-04-17 15:49 3.6KCOILS output, window length 21
[ ]jp_RwQpHRY.coilseq.lupas_282015-04-17 15:49 3.6KCOILS output, window length 28
[ ]jp_RwQpHRY.concise2015-04-17 15:49 116KPrediction: coiled-coil, solvent, alignment
[ ]jp_RwQpHRY.concise.blc2015-04-17 15:49 60KBLC format prediction and alignment data
[ ]jp_RwQpHRY.concise.fasta2015-04-17 15:49 61KPrediction: coiled-coil, solvent, alignment
[ ]jp_RwQpHRY.concise.pdf2015-04-17 15:49 387KPDF prediction and alignment data
[ ]jp_RwQpHRY.concise.ps2015-04-17 15:49 6.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_RwQpHRY.fasta2015-04-17 15:46 99 Input query sequence in FASTA format
[ ]jp_RwQpHRY.full_MSA.fasta2015-04-17 15:49 253KFull MSA before JPred filters in FASTA
[TXT]jp_RwQpHRY.full_MSA.fasta.noGaps.html2015-04-17 15:49 160KFull MSA before JPred filters in FASTA
[TXT]jp_RwQpHRY.full_MSA.fasta.withGaps.html2015-04-17 15:49 1.3MFull MSA before JPred filters in FASTA
[ ]jp_RwQpHRY.hmm2015-04-17 15:49 16KHHMer2 profile of the alignment
[TXT]jp_RwQpHRY.html2015-04-17 15:49 181KHTML prediction and alignment data
[ ]jp_RwQpHRY.input2015-04-17 15:37 92 Raw input data for analysis
[ ]jp_RwQpHRY.jalview2015-04-17 15:49 2.5KJalview annotation file for alignment
[ ]jp_RwQpHRY.jnet2015-04-17 15:49 3.2KJnet secondary structure output
[TXT]jp_RwQpHRY.profile2015-04-17 15:48 14KPSIBLAST profile from alignment
[ ]jp_RwQpHRY.pssm2015-04-17 15:49 18KPSIBLAST PSSM for Jnet
[TXT]jp_RwQpHRY.results.html2016-02-15 12:19 45KJPred results page
[TXT]jp_RwQpHRY.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_RwQpHRY.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_RwQpHRY.seq2015-04-17 15:37 99 Sequence data file
[TXT]jp_RwQpHRY.simple.html2015-04-17 15:49 1.2KBrief HTML: sequence and prediction only
[TXT]jp_RwQpHRY.svg.html2015-04-17 15:50 37KJalview SVG summary of results
[ ]jp_RwQpHRY.tar.gz2015-04-17 15:50 762KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.