JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_z9GtisT.input2015-04-17 19:19 68 Raw input data for analysis
[ ]jp_z9GtisT.seq2015-04-17 19:19 74 Sequence data file
[TXT]d2e9xb2.name2015-04-17 19:19 0 Job name flag file
[ ]jp_z9GtisT.fasta2015-04-17 21:47 74 Input query sequence in FASTA format
[TXT]jp_z9GtisT.profile2015-04-17 21:49 10KPSIBLAST profile from alignment
[ ]jp_z9GtisT.blast.gz2015-04-17 21:49 68KCompressed PSIBLAST output file
[ ]jp_z9GtisT.full_MSA.fasta2015-04-17 21:49 89KFull MSA before JPred filters in FASTA
[ ]jp_z9GtisT.align2015-04-17 21:49 14KPSIBLAST alignment in FASTA format
[ ]jp_z9GtisT.pssm2015-04-17 21:49 13KPSIBLAST PSSM for Jnet
[ ]jp_z9GtisT.hmm2015-04-17 21:49 11KHHMer2 profile of the alignment
[ ]jp_z9GtisT.jnet2015-04-17 21:49 2.3KJnet secondary structure output
[ ]jp_z9GtisT.coilseq.lupas_212015-04-17 21:49 2.6KCOILS output, window length 21
[ ]jp_z9GtisT.coilseq.lupas_142015-04-17 21:49 2.6KCOILS output, window length 14
[ ]jp_z9GtisT.coilseq.lupas_282015-04-17 21:49 2.6KCOILS output, window length 28
[TXT]jp_z9GtisT.coils.csv2015-04-17 21:49 396 COILS output in CSV format
[ ]jp_z9GtisT.concise2015-04-17 21:49 28KPrediction: coiled-coil, solvent, alignment
[TXT]jp_z9GtisT.html2015-04-17 21:49 55KHTML prediction and alignment data
[TXT]jp_z9GtisT.simple.html2015-04-17 21:49 1.1KBrief HTML: sequence and prediction only
[ ]jp_z9GtisT.jalview2015-04-17 21:49 2.0KJalview annotation file for alignment
[ ]jp_z9GtisT.concise.fasta2015-04-17 21:49 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_z9GtisT.concise.blc2015-04-17 21:49 15KBLC format prediction and alignment data
[TXT]jp_z9GtisT.als2015-04-17 21:49 2.1KAlscript command file for PS/PDF output
[ ]jp_z9GtisT.concise.ps2015-04-17 21:49 1.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_z9GtisT.concise.pdf2015-04-17 21:49 98KPDF prediction and alignment data
[TXT]jp_z9GtisT.full_MSA.fasta.withGaps.html2015-04-17 21:49 312KFull MSA before JPred filters in FASTA
[TXT]jp_z9GtisT.full_MSA.fasta.noGaps.html2015-04-17 21:49 71KFull MSA before JPred filters in FASTA
[TXT]jp_z9GtisT.svg.html2015-04-17 21:49 28KJalview SVG summary of results
[TXT]LOG2015-04-17 21:50 4.7KJPred server log file
[ ]jp_z9GtisT.tar.gz2015-04-17 21:50 244KArchive containing complete results
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]jp_z9GtisT.results.html2016-02-15 12:19 36KJPred results page
[TXT]jp_z9GtisT.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_z9GtisT.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.