A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 16:45 | 4.7K | JPred server log file |
| README | 2016-02-15 12:19 | 2.1K | Results file descriptions |
| d2euca1.name | 2015-04-17 16:17 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_byZUqzx.align | 2015-04-17 16:45 | 893 | PSIBLAST alignment in FASTA format |
| jp_byZUqzx.als | 2015-04-17 16:45 | 1.9K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_byZUqzx.blast.gz | 2015-04-17 16:45 | 2.9K | Compressed PSIBLAST output file |
| jp_byZUqzx.coils.csv | 2015-04-17 16:45 | 678 | COILS output in CSV format |
| jp_byZUqzx.coilseq.lupas_14 | 2015-04-17 16:45 | 4.5K | COILS output, window length 14 |
| jp_byZUqzx.coilseq.lupas_21 | 2015-04-17 16:45 | 4.5K | COILS output, window length 21 |
| jp_byZUqzx.coilseq.lupas_28 | 2015-04-17 16:45 | 4.5K | COILS output, window length 28 |
| jp_byZUqzx.concise | 2015-04-17 16:45 | 6.3K | Prediction: coiled-coil, solvent, alignment |
| jp_byZUqzx.concise.blc | 2015-04-17 16:45 | 2.5K | BLC format prediction and alignment data |
| jp_byZUqzx.concise.fasta | 2015-04-17 16:45 | 2.0K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_byZUqzx.concise.pdf | 2015-04-17 16:45 | 18K | PDF prediction and alignment data |
| jp_byZUqzx.concise.ps | 2015-04-17 16:45 | 293K | Prediction: coiled-coil, solvent, alignment |
| jp_byZUqzx.fasta | 2015-04-17 16:44 | 122 | Input query sequence in FASTA format |
| jp_byZUqzx.full_MSA.fasta | 2015-04-17 16:45 | 2.3K | Full MSA before JPred filters in FASTA |
| jp_byZUqzx.full_MSA.fasta.noGaps.html | 2015-04-17 16:45 | 4.1K | Full MSA before JPred filters in FASTA |
| jp_byZUqzx.full_MSA.fasta.withGaps.html | 2015-04-17 16:45 | 5.4K | Full MSA before JPred filters in FASTA |
| jp_byZUqzx.hmm | 2015-04-17 16:45 | 20K | HHMer2 profile of the alignment |
| jp_byZUqzx.html | 2015-04-17 16:45 | 15K | HTML prediction and alignment data |
| jp_byZUqzx.input | 2015-04-17 16:17 | 115 | Raw input data for analysis |
| jp_byZUqzx.jalview | 2015-04-17 16:45 | 3.0K | Jalview annotation file for alignment |
| jp_byZUqzx.jnet | 2015-04-17 16:45 | 4.0K | Jnet secondary structure output |
| jp_byZUqzx.profile | 2015-04-17 16:44 | 18K | PSIBLAST profile from alignment |
| jp_byZUqzx.pssm | 2015-04-17 16:45 | 23K | PSIBLAST PSSM for Jnet |
| jp_byZUqzx.results.html | 2016-02-15 12:19 | 53K | JPred results page |
| jp_byZUqzx.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_byZUqzx.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_byZUqzx.seq | 2015-04-17 16:17 | 122 | Sequence data file |
| jp_byZUqzx.simple.html | 2015-04-17 16:45 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_byZUqzx.svg.html) | jp_byZUqzx.svg.html | 2015-04-17 16:45 | 44K | Jalview SVG summary of results |
| jp_byZUqzx.tar.gz | 2015-04-17 16:45 | 47K | Archive containing complete results |
