JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:46 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2f5tx1.name2015-04-17 16:51 0 Job name flag file
[ ]jp_FTlNHUc.align2015-04-17 17:46 16KPSIBLAST alignment in FASTA format
[TXT]jp_FTlNHUc.als2015-04-17 17:46 2.3KAlscript command file for PS/PDF output
[ ]jp_FTlNHUc.blast.gz2015-04-17 17:46 34KCompressed PSIBLAST output file
[TXT]jp_FTlNHUc.coils.csv2015-04-17 17:46 582 COILS output in CSV format
[ ]jp_FTlNHUc.coilseq.lupas_142015-04-17 17:46 3.9KCOILS output, window length 14
[ ]jp_FTlNHUc.coilseq.lupas_212015-04-17 17:46 3.9KCOILS output, window length 21
[ ]jp_FTlNHUc.coilseq.lupas_282015-04-17 17:46 3.9KCOILS output, window length 28
[ ]jp_FTlNHUc.concise2015-04-17 17:46 34KPrediction: coiled-coil, solvent, alignment
[ ]jp_FTlNHUc.concise.blc2015-04-17 17:46 17KBLC format prediction and alignment data
[ ]jp_FTlNHUc.concise.fasta2015-04-17 17:46 17KPrediction: coiled-coil, solvent, alignment
[ ]jp_FTlNHUc.concise.pdf2015-04-17 17:46 115KPDF prediction and alignment data
[ ]jp_FTlNHUc.concise.ps2015-04-17 17:46 2.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_FTlNHUc.fasta2015-04-17 17:44 106 Input query sequence in FASTA format
[ ]jp_FTlNHUc.full_MSA.fasta2015-04-17 17:46 66KFull MSA before JPred filters in FASTA
[TXT]jp_FTlNHUc.full_MSA.fasta.noGaps.html2015-04-17 17:46 40KFull MSA before JPred filters in FASTA
[TXT]jp_FTlNHUc.full_MSA.fasta.withGaps.html2015-04-17 17:46 295KFull MSA before JPred filters in FASTA
[ ]jp_FTlNHUc.hmm2015-04-17 17:46 17KHHMer2 profile of the alignment
[TXT]jp_FTlNHUc.html2015-04-17 17:46 56KHTML prediction and alignment data
[ ]jp_FTlNHUc.input2015-04-17 16:51 99 Raw input data for analysis
[ ]jp_FTlNHUc.jalview2015-04-17 17:46 2.7KJalview annotation file for alignment
[ ]jp_FTlNHUc.jnet2015-04-17 17:46 3.4KJnet secondary structure output
[TXT]jp_FTlNHUc.profile2015-04-17 17:45 15KPSIBLAST profile from alignment
[ ]jp_FTlNHUc.pssm2015-04-17 17:46 20KPSIBLAST PSSM for Jnet
[TXT]jp_FTlNHUc.results.html2016-02-15 12:19 47KJPred results page
[TXT]jp_FTlNHUc.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_FTlNHUc.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_FTlNHUc.seq2015-04-17 16:51 106 Sequence data file
[TXT]jp_FTlNHUc.simple.html2015-04-17 17:46 1.2KBrief HTML: sequence and prediction only
[TXT]jp_FTlNHUc.svg.html2015-04-17 17:46 39KJalview SVG summary of results
[ ]jp_FTlNHUc.tar.gz2015-04-17 17:46 236KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.