JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:53 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2f69a2.name2015-04-17 18:41 0 Job name flag file
[ ]jp_hKhuKuD.align2015-04-17 20:52 108KPSIBLAST alignment in FASTA format
[TXT]jp_hKhuKuD.als2015-04-17 20:52 2.9KAlscript command file for PS/PDF output
[ ]jp_hKhuKuD.blast.gz2015-04-17 20:50 8.8MCompressed PSIBLAST output file
[TXT]jp_hKhuKuD.coils.csv2015-04-17 20:52 1.0KCOILS output in CSV format
[ ]jp_hKhuKuD.coilseq.lupas_142015-04-17 20:52 7.0KCOILS output, window length 14
[ ]jp_hKhuKuD.coilseq.lupas_212015-04-17 20:52 7.0KCOILS output, window length 21
[ ]jp_hKhuKuD.coilseq.lupas_282015-04-17 20:52 7.0KCOILS output, window length 28
[ ]jp_hKhuKuD.concise2015-04-17 20:52 215KPrediction: coiled-coil, solvent, alignment
[ ]jp_hKhuKuD.concise.blc2015-04-17 20:52 109KBLC format prediction and alignment data
[ ]jp_hKhuKuD.concise.fasta2015-04-17 20:52 110KPrediction: coiled-coil, solvent, alignment
[ ]jp_hKhuKuD.concise.pdf2015-04-17 20:52 687KPDF prediction and alignment data
[ ]jp_hKhuKuD.concise.ps2015-04-17 20:52 13MPrediction: coiled-coil, solvent, alignment
[ ]jp_hKhuKuD.fasta2015-04-17 20:43 181 Input query sequence in FASTA format
[ ]jp_hKhuKuD.full_MSA.fasta2015-04-17 20:51 29MFull MSA before JPred filters in FASTA
[TXT]jp_hKhuKuD.full_MSA.fasta.noGaps.html2015-04-17 20:52 2.7MFull MSA before JPred filters in FASTA
[TXT]jp_hKhuKuD.full_MSA.fasta.withGaps.html2015-04-17 20:52 65MFull MSA before JPred filters in FASTA
[ ]jp_hKhuKuD.hmm2015-04-17 20:52 31KHHMer2 profile of the alignment
[TXT]jp_hKhuKuD.html2015-04-17 20:52 236KHTML prediction and alignment data
[ ]jp_hKhuKuD.input2015-04-17 18:41 173 Raw input data for analysis
[ ]jp_hKhuKuD.jalview2015-04-17 20:52 4.1KJalview annotation file for alignment
[ ]jp_hKhuKuD.jnet2015-04-17 20:52 6.1KJnet secondary structure output
[TXT]jp_hKhuKuD.profile2015-04-17 20:48 27KPSIBLAST profile from alignment
[ ]jp_hKhuKuD.pssm2015-04-17 20:52 36KPSIBLAST PSSM for Jnet
[TXT]jp_hKhuKuD.results.html2016-02-15 12:19 75KJPred results page
[TXT]jp_hKhuKuD.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_hKhuKuD.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_hKhuKuD.seq2015-04-17 18:41 181 Sequence data file
[TXT]jp_hKhuKuD.simple.html2015-04-17 20:52 1.5KBrief HTML: sequence and prediction only
[TXT]jp_hKhuKuD.svg.html2015-04-17 20:53 67KJalview SVG summary of results
[ ]jp_hKhuKuD.tar.gz2015-04-17 20:53 15MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.