JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2ffga1.name2015-04-17 17:29 0 Job name flag file
[ ]jp_zxK8wkO.align2015-04-17 18:43 7.3KPSIBLAST alignment in FASTA format
[TXT]jp_zxK8wkO.als2015-04-17 18:43 2.0KAlscript command file for PS/PDF output
[ ]jp_zxK8wkO.blast.gz2015-04-17 18:43 15KCompressed PSIBLAST output file
[TXT]jp_zxK8wkO.coils.csv2015-04-17 18:43 498 COILS output in CSV format
[ ]jp_zxK8wkO.coilseq.lupas_142015-04-17 18:43 3.3KCOILS output, window length 14
[ ]jp_zxK8wkO.coilseq.lupas_212015-04-17 18:43 3.3KCOILS output, window length 21
[ ]jp_zxK8wkO.coilseq.lupas_282015-04-17 18:43 3.3KCOILS output, window length 28
[ ]jp_zxK8wkO.concise2015-04-17 18:43 17KPrediction: coiled-coil, solvent, alignment
[ ]jp_zxK8wkO.concise.blc2015-04-17 18:43 8.4KBLC format prediction and alignment data
[ ]jp_zxK8wkO.concise.fasta2015-04-17 18:43 8.2KPrediction: coiled-coil, solvent, alignment
[ ]jp_zxK8wkO.concise.pdf2015-04-17 18:43 50KPDF prediction and alignment data
[ ]jp_zxK8wkO.concise.ps2015-04-17 18:43 927KPrediction: coiled-coil, solvent, alignment
[ ]jp_zxK8wkO.fasta2015-04-17 18:41 92 Input query sequence in FASTA format
[ ]jp_zxK8wkO.full_MSA.fasta2015-04-17 18:43 13KFull MSA before JPred filters in FASTA
[TXT]jp_zxK8wkO.full_MSA.fasta.noGaps.html2015-04-17 18:43 26KFull MSA before JPred filters in FASTA
[TXT]jp_zxK8wkO.full_MSA.fasta.withGaps.html2015-04-17 18:43 36KFull MSA before JPred filters in FASTA
[ ]jp_zxK8wkO.hmm2015-04-17 18:43 15KHHMer2 profile of the alignment
[TXT]jp_zxK8wkO.html2015-04-17 18:43 31KHTML prediction and alignment data
[ ]jp_zxK8wkO.input2015-04-17 17:29 85 Raw input data for analysis
[ ]jp_zxK8wkO.jalview2015-04-17 18:43 2.4KJalview annotation file for alignment
[ ]jp_zxK8wkO.jnet2015-04-17 18:43 2.9KJnet secondary structure output
[TXT]jp_zxK8wkO.profile2015-04-17 18:43 13KPSIBLAST profile from alignment
[ ]jp_zxK8wkO.pssm2015-04-17 18:43 17KPSIBLAST PSSM for Jnet
[TXT]jp_zxK8wkO.results.html2016-02-15 12:19 42KJPred results page
[TXT]jp_zxK8wkO.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_zxK8wkO.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_zxK8wkO.seq2015-04-17 17:29 92 Sequence data file
[TXT]jp_zxK8wkO.simple.html2015-04-17 18:43 1.2KBrief HTML: sequence and prediction only
[TXT]jp_zxK8wkO.svg.html2015-04-17 18:43 34KJalview SVG summary of results
[ ]jp_zxK8wkO.tar.gz2015-04-17 18:43 107KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.