JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:47 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fj8a1.name2015-04-17 16:51 0 Job name flag file
[ ]jp_C1wtW_M.align2015-04-17 17:47 8.8KPSIBLAST alignment in FASTA format
[TXT]jp_C1wtW_M.als2015-04-17 17:47 1.6KAlscript command file for PS/PDF output
[ ]jp_C1wtW_M.blast.gz2015-04-17 17:47 25KCompressed PSIBLAST output file
[TXT]jp_C1wtW_M.coils.csv2015-04-17 17:47 384 COILS output in CSV format
[ ]jp_C1wtW_M.coilseq.lupas_142015-04-17 17:47 2.5KCOILS output, window length 14
[ ]jp_C1wtW_M.coilseq.lupas_212015-04-17 17:47 2.5KCOILS output, window length 21
[ ]jp_C1wtW_M.coilseq.lupas_282015-04-17 17:47 2.5KCOILS output, window length 28
[ ]jp_C1wtW_M.concise2015-04-17 17:47 19KPrediction: coiled-coil, solvent, alignment
[ ]jp_C1wtW_M.concise.blc2015-04-17 17:47 9.7KBLC format prediction and alignment data
[ ]jp_C1wtW_M.concise.fasta2015-04-17 17:47 9.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_C1wtW_M.concise.pdf2015-04-17 17:47 52KPDF prediction and alignment data
[ ]jp_C1wtW_M.concise.ps2015-04-17 17:47 970KPrediction: coiled-coil, solvent, alignment
[ ]jp_C1wtW_M.fasta2015-04-17 17:45 72 Input query sequence in FASTA format
[ ]jp_C1wtW_M.full_MSA.fasta2015-04-17 17:47 26KFull MSA before JPred filters in FASTA
[TXT]jp_C1wtW_M.full_MSA.fasta.noGaps.html2015-04-17 17:47 34KFull MSA before JPred filters in FASTA
[TXT]jp_C1wtW_M.full_MSA.fasta.withGaps.html2015-04-17 17:47 178KFull MSA before JPred filters in FASTA
[ ]jp_C1wtW_M.hmm2015-04-17 17:47 11KHHMer2 profile of the alignment
[TXT]jp_C1wtW_M.html2015-04-17 17:47 37KHTML prediction and alignment data
[ ]jp_C1wtW_M.input2015-04-17 16:51 66 Raw input data for analysis
[ ]jp_C1wtW_M.jalview2015-04-17 17:47 2.0KJalview annotation file for alignment
[ ]jp_C1wtW_M.jnet2015-04-17 17:47 2.2KJnet secondary structure output
[TXT]jp_C1wtW_M.profile2015-04-17 17:46 9.8KPSIBLAST profile from alignment
[ ]jp_C1wtW_M.pssm2015-04-17 17:47 13KPSIBLAST PSSM for Jnet
[TXT]jp_C1wtW_M.results.html2016-02-15 12:19 33KJPred results page
[TXT]jp_C1wtW_M.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_C1wtW_M.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_C1wtW_M.seq2015-04-17 16:51 72 Sequence data file
[TXT]jp_C1wtW_M.simple.html2015-04-17 17:47 1.0KBrief HTML: sequence and prediction only
[TXT]jp_C1wtW_M.svg.html2015-04-17 17:47 25KJalview SVG summary of results
[ ]jp_C1wtW_M.tar.gz2015-04-17 17:47 130KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.