JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:51 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fmaa_.name2015-04-17 16:52 0 Job name flag file
[ ]jp_bHjXUG1.align2015-04-17 17:51 3.8KPSIBLAST alignment in FASTA format
[TXT]jp_bHjXUG1.als2015-04-17 17:51 1.7KAlscript command file for PS/PDF output
[ ]jp_bHjXUG1.blast.gz2015-04-17 17:51 39KCompressed PSIBLAST output file
[TXT]jp_bHjXUG1.coils.csv2015-04-17 17:51 384 COILS output in CSV format
[ ]jp_bHjXUG1.coilseq.lupas_142015-04-17 17:51 2.5KCOILS output, window length 14
[ ]jp_bHjXUG1.coilseq.lupas_212015-04-17 17:51 2.5KCOILS output, window length 21
[ ]jp_bHjXUG1.coilseq.lupas_282015-04-17 17:51 2.5KCOILS output, window length 28
[ ]jp_bHjXUG1.concise2015-04-17 17:51 9.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_bHjXUG1.concise.blc2015-04-17 17:51 4.7KBLC format prediction and alignment data
[ ]jp_bHjXUG1.concise.fasta2015-04-17 17:51 4.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_bHjXUG1.concise.pdf2015-04-17 17:51 27KPDF prediction and alignment data
[ ]jp_bHjXUG1.concise.ps2015-04-17 17:51 480KPrediction: coiled-coil, solvent, alignment
[ ]jp_bHjXUG1.fasta2015-04-17 17:45 72 Input query sequence in FASTA format
[ ]jp_bHjXUG1.full_MSA.fasta2015-04-17 17:51 50KFull MSA before JPred filters in FASTA
[TXT]jp_bHjXUG1.full_MSA.fasta.noGaps.html2015-04-17 17:51 55KFull MSA before JPred filters in FASTA
[TXT]jp_bHjXUG1.full_MSA.fasta.withGaps.html2015-04-17 17:51 160KFull MSA before JPred filters in FASTA
[ ]jp_bHjXUG1.hmm2015-04-17 17:51 11KHHMer2 profile of the alignment
[TXT]jp_bHjXUG1.html2015-04-17 17:51 20KHTML prediction and alignment data
[ ]jp_bHjXUG1.input2015-04-17 16:52 66 Raw input data for analysis
[ ]jp_bHjXUG1.jalview2015-04-17 17:51 2.0KJalview annotation file for alignment
[ ]jp_bHjXUG1.jnet2015-04-17 17:51 2.2KJnet secondary structure output
[TXT]jp_bHjXUG1.profile2015-04-17 17:50 9.8KPSIBLAST profile from alignment
[ ]jp_bHjXUG1.pssm2015-04-17 17:51 13KPSIBLAST PSSM for Jnet
[TXT]jp_bHjXUG1.results.html2016-02-15 12:19 34KJPred results page
[TXT]jp_bHjXUG1.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_bHjXUG1.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_bHjXUG1.seq2015-04-17 16:52 72 Sequence data file
[TXT]jp_bHjXUG1.simple.html2015-04-17 17:51 1.1KBrief HTML: sequence and prediction only
[TXT]jp_bHjXUG1.svg.html2015-04-17 17:51 26KJalview SVG summary of results
[ ]jp_bHjXUG1.tar.gz2015-04-17 17:51 109KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.