JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:11 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fyga1.name2015-04-17 17:43 0 Job name flag file
[ ]jp_iUyKFGV.align2015-04-17 19:11 2.2KPSIBLAST alignment in FASTA format
[TXT]jp_iUyKFGV.als2015-04-17 19:11 2.8KAlscript command file for PS/PDF output
[ ]jp_iUyKFGV.blast.gz2015-04-17 19:11 13KCompressed PSIBLAST output file
[TXT]jp_iUyKFGV.coils.csv2015-04-17 19:11 768 COILS output in CSV format
[ ]jp_iUyKFGV.coilseq.lupas_142015-04-17 19:11 5.2KCOILS output, window length 14
[ ]jp_iUyKFGV.coilseq.lupas_212015-04-17 19:11 5.2KCOILS output, window length 21
[ ]jp_iUyKFGV.coilseq.lupas_282015-04-17 19:11 5.2KCOILS output, window length 28
[ ]jp_iUyKFGV.concise2015-04-17 19:11 9.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_iUyKFGV.concise.blc2015-04-17 19:11 4.1KBLC format prediction and alignment data
[ ]jp_iUyKFGV.concise.fasta2015-04-17 19:11 3.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_iUyKFGV.concise.pdf2015-04-17 19:11 27KPDF prediction and alignment data
[ ]jp_iUyKFGV.concise.ps2015-04-17 19:11 463KPrediction: coiled-coil, solvent, alignment
[ ]jp_iUyKFGV.fasta2015-04-17 19:07 137 Input query sequence in FASTA format
[ ]jp_iUyKFGV.full_MSA.fasta2015-04-17 19:11 16KFull MSA before JPred filters in FASTA
[TXT]jp_iUyKFGV.full_MSA.fasta.noGaps.html2015-04-17 19:11 27KFull MSA before JPred filters in FASTA
[TXT]jp_iUyKFGV.full_MSA.fasta.withGaps.html2015-04-17 19:11 36KFull MSA before JPred filters in FASTA
[ ]jp_iUyKFGV.hmm2015-04-17 19:11 23KHHMer2 profile of the alignment
[TXT]jp_iUyKFGV.html2015-04-17 19:11 17KHTML prediction and alignment data
[ ]jp_iUyKFGV.input2015-04-17 17:43 130 Raw input data for analysis
[ ]jp_iUyKFGV.jalview2015-04-17 19:11 3.3KJalview annotation file for alignment
[ ]jp_iUyKFGV.jnet2015-04-17 19:11 4.6KJnet secondary structure output
[TXT]jp_iUyKFGV.profile2015-04-17 19:09 20KPSIBLAST profile from alignment
[ ]jp_iUyKFGV.pssm2015-04-17 19:11 26KPSIBLAST PSSM for Jnet
[TXT]jp_iUyKFGV.results.html2016-02-15 12:19 60KJPred results page
[TXT]jp_iUyKFGV.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_iUyKFGV.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_iUyKFGV.seq2015-04-17 17:43 137 Sequence data file
[TXT]jp_iUyKFGV.simple.html2015-04-17 19:11 1.4KBrief HTML: sequence and prediction only
[TXT]jp_iUyKFGV.svg.html2015-04-17 19:11 52KJalview SVG summary of results
[ ]jp_iUyKFGV.tar.gz2015-04-17 19:11 82KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.