JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_JquWmEb.tar.gz2015-04-17 20:50 2.3MArchive containing complete results
[TXT]jp_JquWmEb.svg.html2015-04-17 20:50 54KJalview SVG summary of results
[TXT]jp_JquWmEb.simple.html2015-04-17 20:50 1.3KBrief HTML: sequence and prediction only
[ ]jp_JquWmEb.seq2015-04-17 18:42 144 Sequence data file
[TXT]jp_JquWmEb.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[TXT]jp_JquWmEb.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_JquWmEb.results.html2016-02-15 12:19 62KJPred results page
[ ]jp_JquWmEb.pssm2015-04-17 20:50 28KPSIBLAST PSSM for Jnet
[TXT]jp_JquWmEb.profile2015-04-17 20:47 21KPSIBLAST profile from alignment
[ ]jp_JquWmEb.jnet2015-04-17 20:50 4.8KJnet secondary structure output
[ ]jp_JquWmEb.jalview2015-04-17 20:50 3.4KJalview annotation file for alignment
[ ]jp_JquWmEb.input2015-04-17 18:42 137 Raw input data for analysis
[TXT]jp_JquWmEb.html2015-04-17 20:50 238KHTML prediction and alignment data
[ ]jp_JquWmEb.hmm2015-04-17 20:50 24KHHMer2 profile of the alignment
[TXT]jp_JquWmEb.full_MSA.fasta.withGaps.html2015-04-17 20:50 4.6MFull MSA before JPred filters in FASTA
[TXT]jp_JquWmEb.full_MSA.fasta.noGaps.html2015-04-17 20:50 545KFull MSA before JPred filters in FASTA
[ ]jp_JquWmEb.full_MSA.fasta2015-04-17 20:50 853KFull MSA before JPred filters in FASTA
[ ]jp_JquWmEb.fasta2015-04-17 20:44 144 Input query sequence in FASTA format
[ ]jp_JquWmEb.concise.ps2015-04-17 20:50 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_JquWmEb.concise.pdf2015-04-17 20:50 674KPDF prediction and alignment data
[ ]jp_JquWmEb.concise.fasta2015-04-17 20:50 99KPrediction: coiled-coil, solvent, alignment
[ ]jp_JquWmEb.concise.blc2015-04-17 20:50 98KBLC format prediction and alignment data
[ ]jp_JquWmEb.concise2015-04-17 20:50 192KPrediction: coiled-coil, solvent, alignment
[ ]jp_JquWmEb.coilseq.lupas_282015-04-17 20:50 5.5KCOILS output, window length 28
[ ]jp_JquWmEb.coilseq.lupas_212015-04-17 20:50 5.5KCOILS output, window length 21
[ ]jp_JquWmEb.coilseq.lupas_142015-04-17 20:50 5.5KCOILS output, window length 14
[TXT]jp_JquWmEb.coils.csv2015-04-17 20:50 810 COILS output in CSV format
[ ]jp_JquWmEb.blast.gz2015-04-17 20:50 919KCompressed PSIBLAST output file
[TXT]jp_JquWmEb.als2015-04-17 20:50 2.4KAlscript command file for PS/PDF output
[ ]jp_JquWmEb.align2015-04-17 20:50 98KPSIBLAST alignment in FASTA format
[TXT]d2fyxa1.name2015-04-17 18:42 0 Job name flag file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]LOG2015-04-17 20:50 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.