JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:17 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2g7oa1.name2015-04-17 17:45 0 Job name flag file
[ ]jp_JGGM9GA.align2015-04-17 19:16 1.9KPSIBLAST alignment in FASTA format
[TXT]jp_JGGM9GA.als2015-04-17 19:16 1.4KAlscript command file for PS/PDF output
[ ]jp_JGGM9GA.blast.gz2015-04-17 19:16 4.9KCompressed PSIBLAST output file
[TXT]jp_JGGM9GA.coils.csv2015-04-17 19:16 438 COILS output in CSV format
[ ]jp_JGGM9GA.coilseq.lupas_142015-04-17 19:16 2.9KCOILS output, window length 14
[ ]jp_JGGM9GA.coilseq.lupas_212015-04-17 19:16 2.9KCOILS output, window length 21
[ ]jp_JGGM9GA.coilseq.lupas_282015-04-17 19:16 2.9KCOILS output, window length 28
[ ]jp_JGGM9GA.concise2015-04-17 19:16 6.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_JGGM9GA.concise.blc2015-04-17 19:16 2.9KBLC format prediction and alignment data
[ ]jp_JGGM9GA.concise.fasta2015-04-17 19:16 2.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_JGGM9GA.concise.pdf2015-04-17 19:17 19KPDF prediction and alignment data
[ ]jp_JGGM9GA.concise.ps2015-04-17 19:16 319KPrediction: coiled-coil, solvent, alignment
[ ]jp_JGGM9GA.fasta2015-04-17 19:10 81 Input query sequence in FASTA format
[ ]jp_JGGM9GA.full_MSA.fasta2015-04-17 19:16 3.6KFull MSA before JPred filters in FASTA
[TXT]jp_JGGM9GA.full_MSA.fasta.noGaps.html2015-04-17 19:17 8.4KFull MSA before JPred filters in FASTA
[TXT]jp_JGGM9GA.full_MSA.fasta.withGaps.html2015-04-17 19:17 9.4KFull MSA before JPred filters in FASTA
[ ]jp_JGGM9GA.hmm2015-04-17 19:16 13KHHMer2 profile of the alignment
[TXT]jp_JGGM9GA.html2015-04-17 19:16 15KHTML prediction and alignment data
[ ]jp_JGGM9GA.input2015-04-17 17:45 75 Raw input data for analysis
[ ]jp_JGGM9GA.jalview2015-04-17 19:16 2.2KJalview annotation file for alignment
[ ]jp_JGGM9GA.jnet2015-04-17 19:16 2.6KJnet secondary structure output
[TXT]jp_JGGM9GA.profile2015-04-17 19:15 11KPSIBLAST profile from alignment
[ ]jp_JGGM9GA.pssm2015-04-17 19:16 15KPSIBLAST PSSM for Jnet
[TXT]jp_JGGM9GA.results.html2016-02-15 12:19 36KJPred results page
[TXT]jp_JGGM9GA.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_JGGM9GA.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_JGGM9GA.seq2015-04-17 17:45 81 Sequence data file
[TXT]jp_JGGM9GA.simple.html2015-04-17 19:16 1.0KBrief HTML: sequence and prediction only
[TXT]jp_JGGM9GA.svg.html2015-04-17 19:17 28KJalview SVG summary of results
[ ]jp_JGGM9GA.tar.gz2015-04-17 19:17 48KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.