A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:50 | 4.7K | JPred server log file |
| README | 2016-02-15 12:19 | 2.1K | Results file descriptions |
| d2gboa1.name | 2015-04-17 18:43 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_RczJUQ8.align | 2015-04-17 20:50 | 6.9K | PSIBLAST alignment in FASTA format |
| jp_RczJUQ8.als | 2015-04-17 20:50 | 1.7K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_RczJUQ8.blast.gz | 2015-04-17 20:50 | 30K | Compressed PSIBLAST output file |
| jp_RczJUQ8.coils.csv | 2015-04-17 20:50 | 522 | COILS output in CSV format |
| jp_RczJUQ8.coilseq.lupas_14 | 2015-04-17 20:50 | 3.4K | COILS output, window length 14 |
| jp_RczJUQ8.coilseq.lupas_21 | 2015-04-17 20:50 | 3.4K | COILS output, window length 21 |
| jp_RczJUQ8.coilseq.lupas_28 | 2015-04-17 20:50 | 3.4K | COILS output, window length 28 |
| jp_RczJUQ8.concise | 2015-04-17 20:50 | 16K | Prediction: coiled-coil, solvent, alignment |
| jp_RczJUQ8.concise.blc | 2015-04-17 20:50 | 8.1K | BLC format prediction and alignment data |
| jp_RczJUQ8.concise.fasta | 2015-04-17 20:50 | 7.8K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_RczJUQ8.concise.pdf | 2015-04-17 20:50 | 51K | PDF prediction and alignment data |
| jp_RczJUQ8.concise.ps | 2015-04-17 20:50 | 915K | Prediction: coiled-coil, solvent, alignment |
| jp_RczJUQ8.fasta | 2015-04-17 20:45 | 96 | Input query sequence in FASTA format |
| jp_RczJUQ8.full_MSA.fasta | 2015-04-17 20:50 | 21K | Full MSA before JPred filters in FASTA |
| jp_RczJUQ8.full_MSA.fasta.noGaps.html | 2015-04-17 20:50 | 41K | Full MSA before JPred filters in FASTA |
| jp_RczJUQ8.full_MSA.fasta.withGaps.html | 2015-04-17 20:50 | 65K | Full MSA before JPred filters in FASTA |
| jp_RczJUQ8.hmm | 2015-04-17 20:50 | 15K | HHMer2 profile of the alignment |
| jp_RczJUQ8.html | 2015-04-17 20:50 | 30K | HTML prediction and alignment data |
| jp_RczJUQ8.input | 2015-04-17 18:43 | 89 | Raw input data for analysis |
| jp_RczJUQ8.jalview | 2015-04-17 20:50 | 2.5K | Jalview annotation file for alignment |
| jp_RczJUQ8.jnet | 2015-04-17 20:50 | 3.1K | Jnet secondary structure output |
| jp_RczJUQ8.profile | 2015-04-17 20:48 | 13K | PSIBLAST profile from alignment |
| jp_RczJUQ8.pssm | 2015-04-17 20:50 | 18K | PSIBLAST PSSM for Jnet |
| jp_RczJUQ8.results.html | 2016-02-15 12:19 | 43K | JPred results page |
| jp_RczJUQ8.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_RczJUQ8.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_RczJUQ8.seq | 2015-04-17 18:43 | 96 | Sequence data file |
| jp_RczJUQ8.simple.html | 2015-04-17 20:50 | 1.1K | Brief HTML: sequence and prediction only |
![[TXT]](jp_RczJUQ8.svg.html) | jp_RczJUQ8.svg.html | 2015-04-17 20:50 | 35K | Jalview SVG summary of results |
| jp_RczJUQ8.tar.gz | 2015-04-17 20:50 | 128K | Archive containing complete results |
