JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:49 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2geca1.name2015-04-17 17:30 0 Job name flag file
[ ]jp_F8qqjaO.align2015-04-17 18:49 7.0KPSIBLAST alignment in FASTA format
[TXT]jp_F8qqjaO.als2015-04-17 18:49 2.3KAlscript command file for PS/PDF output
[ ]jp_F8qqjaO.blast.gz2015-04-17 18:49 22KCompressed PSIBLAST output file
[TXT]jp_F8qqjaO.coils.csv2015-04-17 18:49 858 COILS output in CSV format
[ ]jp_F8qqjaO.coilseq.lupas_142015-04-17 18:49 5.8KCOILS output, window length 14
[ ]jp_F8qqjaO.coilseq.lupas_212015-04-17 18:49 5.8KCOILS output, window length 21
[ ]jp_F8qqjaO.coilseq.lupas_282015-04-17 18:49 5.8KCOILS output, window length 28
[ ]jp_F8qqjaO.concise2015-04-17 18:49 19KPrediction: coiled-coil, solvent, alignment
[ ]jp_F8qqjaO.concise.blc2015-04-17 18:49 9.1KBLC format prediction and alignment data
[ ]jp_F8qqjaO.concise.fasta2015-04-17 18:49 8.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_F8qqjaO.concise.pdf2015-04-17 18:49 52KPDF prediction and alignment data
[ ]jp_F8qqjaO.concise.ps2015-04-17 18:49 1.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_F8qqjaO.fasta2015-04-17 18:43 152 Input query sequence in FASTA format
[ ]jp_F8qqjaO.full_MSA.fasta2015-04-17 18:49 18KFull MSA before JPred filters in FASTA
[TXT]jp_F8qqjaO.full_MSA.fasta.noGaps.html2015-04-17 18:49 26KFull MSA before JPred filters in FASTA
[TXT]jp_F8qqjaO.full_MSA.fasta.withGaps.html2015-04-17 18:49 58KFull MSA before JPred filters in FASTA
[ ]jp_F8qqjaO.hmm2015-04-17 18:49 26KHHMer2 profile of the alignment
[TXT]jp_F8qqjaO.html2015-04-17 18:49 25KHTML prediction and alignment data
[ ]jp_F8qqjaO.input2015-04-17 17:30 145 Raw input data for analysis
[ ]jp_F8qqjaO.jalview2015-04-17 18:49 3.5KJalview annotation file for alignment
[ ]jp_F8qqjaO.jnet2015-04-17 18:49 5.1KJnet secondary structure output
[TXT]jp_F8qqjaO.profile2015-04-17 18:47 22KPSIBLAST profile from alignment
[ ]jp_F8qqjaO.pssm2015-04-17 18:49 30KPSIBLAST PSSM for Jnet
[TXT]jp_F8qqjaO.results.html2016-02-15 12:19 63KJPred results page
[TXT]jp_F8qqjaO.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_F8qqjaO.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_F8qqjaO.seq2015-04-17 17:30 152 Sequence data file
[TXT]jp_F8qqjaO.simple.html2015-04-17 18:49 1.3KBrief HTML: sequence and prediction only
[TXT]jp_F8qqjaO.svg.html2015-04-17 18:49 55KJalview SVG summary of results
[ ]jp_F8qqjaO.tar.gz2015-04-17 18:49 127KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.