JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:51 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2ghvc1.name2015-04-17 18:43 0 Job name flag file
[ ]jp_LZiaWRh.align2015-04-17 20:51 6.7KPSIBLAST alignment in FASTA format
[TXT]jp_LZiaWRh.als2015-04-17 20:51 2.6KAlscript command file for PS/PDF output
[ ]jp_LZiaWRh.blast.gz2015-04-17 20:51 13KCompressed PSIBLAST output file
[TXT]jp_LZiaWRh.coils.csv2015-04-17 20:51 1.1KCOILS output in CSV format
[ ]jp_LZiaWRh.coilseq.lupas_142015-04-17 20:51 7.7KCOILS output, window length 14
[ ]jp_LZiaWRh.coilseq.lupas_212015-04-17 20:51 7.7KCOILS output, window length 21
[ ]jp_LZiaWRh.coilseq.lupas_282015-04-17 20:51 7.7KCOILS output, window length 28
[ ]jp_LZiaWRh.concise2015-04-17 20:51 21KPrediction: coiled-coil, solvent, alignment
[ ]jp_LZiaWRh.concise.blc2015-04-17 20:51 9.4KBLC format prediction and alignment data
[ ]jp_LZiaWRh.concise.fasta2015-04-17 20:51 8.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_LZiaWRh.concise.pdf2015-04-17 20:51 58KPDF prediction and alignment data
[ ]jp_LZiaWRh.concise.ps2015-04-17 20:51 1.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_LZiaWRh.fasta2015-04-17 20:45 198 Input query sequence in FASTA format
[ ]jp_LZiaWRh.full_MSA.fasta2015-04-17 20:51 16KFull MSA before JPred filters in FASTA
[TXT]jp_LZiaWRh.full_MSA.fasta.noGaps.html2015-04-17 20:51 18KFull MSA before JPred filters in FASTA
[TXT]jp_LZiaWRh.full_MSA.fasta.withGaps.html2015-04-17 20:51 56KFull MSA before JPred filters in FASTA
[ ]jp_LZiaWRh.hmm2015-04-17 20:51 34KHHMer2 profile of the alignment
[TXT]jp_LZiaWRh.html2015-04-17 20:51 27KHTML prediction and alignment data
[ ]jp_LZiaWRh.input2015-04-17 18:43 190 Raw input data for analysis
[ ]jp_LZiaWRh.jalview2015-04-17 20:51 4.4KJalview annotation file for alignment
[ ]jp_LZiaWRh.jnet2015-04-17 20:51 6.7KJnet secondary structure output
[TXT]jp_LZiaWRh.profile2015-04-17 20:48 29KPSIBLAST profile from alignment
[ ]jp_LZiaWRh.pssm2015-04-17 20:51 39KPSIBLAST PSSM for Jnet
[TXT]jp_LZiaWRh.results.html2016-02-15 12:19 81KJPred results page
[TXT]jp_LZiaWRh.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_LZiaWRh.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_LZiaWRh.seq2015-04-17 18:43 198 Sequence data file
[TXT]jp_LZiaWRh.simple.html2015-04-17 20:51 1.4KBrief HTML: sequence and prediction only
[TXT]jp_LZiaWRh.svg.html2015-04-17 20:51 73KJalview SVG summary of results
[ ]jp_LZiaWRh.tar.gz2015-04-17 20:51 131KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.