JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:26 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2gkga_.name2015-04-17 19:20 0 Job name flag file
[ ]jp_No835ry.align2015-04-17 22:26 112KPSIBLAST alignment in FASTA format
[TXT]jp_No835ry.als2015-04-17 22:26 2.5KAlscript command file for PS/PDF output
[ ]jp_No835ry.blast.gz2015-04-17 22:25 4.6MCompressed PSIBLAST output file
[TXT]jp_No835ry.coils.csv2015-04-17 22:26 762 COILS output in CSV format
[ ]jp_No835ry.coilseq.lupas_142015-04-17 22:26 5.1KCOILS output, window length 14
[ ]jp_No835ry.coilseq.lupas_212015-04-17 22:26 5.1KCOILS output, window length 21
[ ]jp_No835ry.coilseq.lupas_282015-04-17 22:26 5.1KCOILS output, window length 28
[ ]jp_No835ry.concise2015-04-17 22:26 219KPrediction: coiled-coil, solvent, alignment
[ ]jp_No835ry.concise.blc2015-04-17 22:26 113KBLC format prediction and alignment data
[ ]jp_No835ry.concise.fasta2015-04-17 22:26 114KPrediction: coiled-coil, solvent, alignment
[ ]jp_No835ry.concise.pdf2015-04-17 22:26 756KPDF prediction and alignment data
[ ]jp_No835ry.concise.ps2015-04-17 22:26 13MPrediction: coiled-coil, solvent, alignment
[ ]jp_No835ry.fasta2015-04-17 21:50 136 Input query sequence in FASTA format
[ ]jp_No835ry.full_MSA.fasta2015-04-17 22:25 5.5MFull MSA before JPred filters in FASTA
[TXT]jp_No835ry.full_MSA.fasta.noGaps.html2015-04-17 22:26 2.5MFull MSA before JPred filters in FASTA
[TXT]jp_No835ry.full_MSA.fasta.withGaps.html2015-04-17 22:26 28MFull MSA before JPred filters in FASTA
[ ]jp_No835ry.hmm2015-04-17 22:26 23KHHMer2 profile of the alignment
[TXT]jp_No835ry.html2015-04-17 22:26 281KHTML prediction and alignment data
[ ]jp_No835ry.input2015-04-17 19:20 129 Raw input data for analysis
[ ]jp_No835ry.jalview2015-04-17 22:26 3.3KJalview annotation file for alignment
[ ]jp_No835ry.jnet2015-04-17 22:26 4.5KJnet secondary structure output
[TXT]jp_No835ry.profile2015-04-17 22:21 20KPSIBLAST profile from alignment
[ ]jp_No835ry.pssm2015-04-17 22:26 26KPSIBLAST PSSM for Jnet
[TXT]jp_No835ry.results.html2016-02-15 12:19 59KJPred results page
[TXT]jp_No835ry.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_No835ry.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_No835ry.seq2015-04-17 19:20 136 Sequence data file
[TXT]jp_No835ry.simple.html2015-04-17 22:26 1.3KBrief HTML: sequence and prediction only
[TXT]jp_No835ry.svg.html2015-04-17 22:26 51KJalview SVG summary of results
[ ]jp_No835ry.tar.gz2015-04-17 22:26 8.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.