JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:51 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2grrb_.name2015-04-17 15:38 0 Job name flag file
[ ]jp_WL7Fsfh.align2015-04-17 15:51 13KPSIBLAST alignment in FASTA format
[TXT]jp_WL7Fsfh.als2015-04-17 15:51 2.5KAlscript command file for PS/PDF output
[ ]jp_WL7Fsfh.blast.gz2015-04-17 15:51 47KCompressed PSIBLAST output file
[TXT]jp_WL7Fsfh.coils.csv2015-04-17 15:51 972 COILS output in CSV format
[ ]jp_WL7Fsfh.coilseq.lupas_142015-04-17 15:51 6.6KCOILS output, window length 14
[ ]jp_WL7Fsfh.coilseq.lupas_212015-04-17 15:51 6.6KCOILS output, window length 21
[ ]jp_WL7Fsfh.coilseq.lupas_282015-04-17 15:51 6.6KCOILS output, window length 28
[ ]jp_WL7Fsfh.concise2015-04-17 15:51 31KPrediction: coiled-coil, solvent, alignment
[ ]jp_WL7Fsfh.concise.blc2015-04-17 15:51 15KBLC format prediction and alignment data
[ ]jp_WL7Fsfh.concise.fasta2015-04-17 15:51 15KPrediction: coiled-coil, solvent, alignment
[ ]jp_WL7Fsfh.concise.pdf2015-04-17 15:51 101KPDF prediction and alignment data
[ ]jp_WL7Fsfh.concise.ps2015-04-17 15:51 1.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_WL7Fsfh.fasta2015-04-17 15:49 172 Input query sequence in FASTA format
[ ]jp_WL7Fsfh.full_MSA.fasta2015-04-17 15:51 61KFull MSA before JPred filters in FASTA
[TXT]jp_WL7Fsfh.full_MSA.fasta.noGaps.html2015-04-17 15:51 36KFull MSA before JPred filters in FASTA
[TXT]jp_WL7Fsfh.full_MSA.fasta.withGaps.html2015-04-17 15:51 277KFull MSA before JPred filters in FASTA
[ ]jp_WL7Fsfh.hmm2015-04-17 15:51 29KHHMer2 profile of the alignment
[TXT]jp_WL7Fsfh.html2015-04-17 15:51 44KHTML prediction and alignment data
[ ]jp_WL7Fsfh.input2015-04-17 15:38 164 Raw input data for analysis
[ ]jp_WL7Fsfh.jalview2015-04-17 15:51 4.0KJalview annotation file for alignment
[ ]jp_WL7Fsfh.jnet2015-04-17 15:51 5.8KJnet secondary structure output
[TXT]jp_WL7Fsfh.profile2015-04-17 15:50 25KPSIBLAST profile from alignment
[ ]jp_WL7Fsfh.pssm2015-04-17 15:51 34KPSIBLAST PSSM for Jnet
[TXT]jp_WL7Fsfh.results.html2016-02-15 12:19 73KJPred results page
[TXT]jp_WL7Fsfh.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_WL7Fsfh.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_WL7Fsfh.seq2015-04-17 15:38 172 Sequence data file
[TXT]jp_WL7Fsfh.simple.html2015-04-17 15:51 1.4KBrief HTML: sequence and prediction only
[TXT]jp_WL7Fsfh.svg.html2015-04-17 15:51 65KJalview SVG summary of results
[ ]jp_WL7Fsfh.tar.gz2015-04-17 15:51 235KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.