JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:53 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2guda1.name2015-04-17 15:38 0 Job name flag file
[ ]jp_4CdkN65.align2015-04-17 15:52 125KPSIBLAST alignment in FASTA format
[TXT]jp_4CdkN65.als2015-04-17 15:52 2.6KAlscript command file for PS/PDF output
[ ]jp_4CdkN65.blast.gz2015-04-17 15:52 1.3MCompressed PSIBLAST output file
[TXT]jp_4CdkN65.coils.csv2015-04-17 15:52 756 COILS output in CSV format
[ ]jp_4CdkN65.coilseq.lupas_142015-04-17 15:52 5.1KCOILS output, window length 14
[ ]jp_4CdkN65.coilseq.lupas_212015-04-17 15:52 5.1KCOILS output, window length 21
[ ]jp_4CdkN65.coilseq.lupas_282015-04-17 15:52 5.1KCOILS output, window length 28
[ ]jp_4CdkN65.concise2015-04-17 15:52 244KPrediction: coiled-coil, solvent, alignment
[ ]jp_4CdkN65.concise.blc2015-04-17 15:52 125KBLC format prediction and alignment data
[ ]jp_4CdkN65.concise.fasta2015-04-17 15:52 127KPrediction: coiled-coil, solvent, alignment
[ ]jp_4CdkN65.concise.pdf2015-04-17 15:52 773KPDF prediction and alignment data
[ ]jp_4CdkN65.concise.ps2015-04-17 15:52 14MPrediction: coiled-coil, solvent, alignment
[ ]jp_4CdkN65.fasta2015-04-17 15:49 135 Input query sequence in FASTA format
[ ]jp_4CdkN65.full_MSA.fasta2015-04-17 15:52 3.4MFull MSA before JPred filters in FASTA
[TXT]jp_4CdkN65.full_MSA.fasta.noGaps.html2015-04-17 15:53 539KFull MSA before JPred filters in FASTA
[TXT]jp_4CdkN65.full_MSA.fasta.withGaps.html2015-04-17 15:53 9.1MFull MSA before JPred filters in FASTA
[ ]jp_4CdkN65.hmm2015-04-17 15:52 23KHHMer2 profile of the alignment
[TXT]jp_4CdkN65.html2015-04-17 15:52 313KHTML prediction and alignment data
[ ]jp_4CdkN65.input2015-04-17 15:38 128 Raw input data for analysis
[ ]jp_4CdkN65.jalview2015-04-17 15:52 3.2KJalview annotation file for alignment
[ ]jp_4CdkN65.jnet2015-04-17 15:52 4.5KJnet secondary structure output
[TXT]jp_4CdkN65.profile2015-04-17 15:51 20KPSIBLAST profile from alignment
[ ]jp_4CdkN65.pssm2015-04-17 15:52 26KPSIBLAST PSSM for Jnet
[TXT]jp_4CdkN65.results.html2016-02-15 12:20 57KJPred results page
[TXT]jp_4CdkN65.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_4CdkN65.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_4CdkN65.seq2015-04-17 15:38 135 Sequence data file
[TXT]jp_4CdkN65.simple.html2015-04-17 15:52 1.3KBrief HTML: sequence and prediction only
[TXT]jp_4CdkN65.svg.html2015-04-17 15:53 49KJalview SVG summary of results
[ ]jp_4CdkN65.tar.gz2015-04-17 15:53 3.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.