JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:46 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2gyka1.name2015-04-17 17:31 0 Job name flag file
[ ]jp_QgZgDxi.align2015-04-17 18:46 23KPSIBLAST alignment in FASTA format
[TXT]jp_QgZgDxi.als2015-04-17 18:46 1.8KAlscript command file for PS/PDF output
[ ]jp_QgZgDxi.blast.gz2015-04-17 18:46 62KCompressed PSIBLAST output file
[TXT]jp_QgZgDxi.coils.csv2015-04-17 18:46 528 COILS output in CSV format
[ ]jp_QgZgDxi.coilseq.lupas_142015-04-17 18:46 3.5KCOILS output, window length 14
[ ]jp_QgZgDxi.coilseq.lupas_212015-04-17 18:46 3.5KCOILS output, window length 21
[ ]jp_QgZgDxi.coilseq.lupas_282015-04-17 18:46 3.5KCOILS output, window length 28
[ ]jp_QgZgDxi.concise2015-04-17 18:46 47KPrediction: coiled-coil, solvent, alignment
[ ]jp_QgZgDxi.concise.blc2015-04-17 18:46 24KBLC format prediction and alignment data
[ ]jp_QgZgDxi.concise.fasta2015-04-17 18:46 24KPrediction: coiled-coil, solvent, alignment
[ ]jp_QgZgDxi.concise.pdf2015-04-17 18:46 140KPDF prediction and alignment data
[ ]jp_QgZgDxi.concise.ps2015-04-17 18:46 2.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_QgZgDxi.fasta2015-04-17 18:44 97 Input query sequence in FASTA format
[ ]jp_QgZgDxi.full_MSA.fasta2015-04-17 18:46 66KFull MSA before JPred filters in FASTA
[TXT]jp_QgZgDxi.full_MSA.fasta.noGaps.html2015-04-17 18:46 65KFull MSA before JPred filters in FASTA
[TXT]jp_QgZgDxi.full_MSA.fasta.withGaps.html2015-04-17 18:46 313KFull MSA before JPred filters in FASTA
[ ]jp_QgZgDxi.hmm2015-04-17 18:46 16KHHMer2 profile of the alignment
[TXT]jp_QgZgDxi.html2015-04-17 18:46 76KHTML prediction and alignment data
[ ]jp_QgZgDxi.input2015-04-17 17:31 90 Raw input data for analysis
[ ]jp_QgZgDxi.jalview2015-04-17 18:46 2.5KJalview annotation file for alignment
[ ]jp_QgZgDxi.jnet2015-04-17 18:46 3.1KJnet secondary structure output
[TXT]jp_QgZgDxi.profile2015-04-17 18:45 14KPSIBLAST profile from alignment
[ ]jp_QgZgDxi.pssm2015-04-17 18:46 18KPSIBLAST PSSM for Jnet
[TXT]jp_QgZgDxi.results.html2016-02-15 12:20 43KJPred results page
[TXT]jp_QgZgDxi.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_QgZgDxi.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_QgZgDxi.seq2015-04-17 17:31 97 Sequence data file
[TXT]jp_QgZgDxi.simple.html2015-04-17 18:46 1.1KBrief HTML: sequence and prediction only
[TXT]jp_QgZgDxi.svg.html2015-04-17 18:46 35KJalview SVG summary of results
[ ]jp_QgZgDxi.tar.gz2015-04-17 18:46 299KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.