JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_6qWJHdY.als2015-04-17 15:53 1.7KAlscript command file for PS/PDF output
[ ]jp_6qWJHdY.tar.gz2015-04-17 15:53 47KArchive containing complete results
[ ]jp_6qWJHdY.concise.blc2015-04-17 15:53 2.1KBLC format prediction and alignment data
[TXT]jp_6qWJHdY.simple.html2015-04-17 15:53 1.0KBrief HTML: sequence and prediction only
[TXT]jp_6qWJHdY.coils.csv2015-04-17 15:53 426 COILS output in CSV format
[ ]jp_6qWJHdY.coilseq.lupas_142015-04-17 15:53 2.8KCOILS output, window length 14
[ ]jp_6qWJHdY.coilseq.lupas_212015-04-17 15:53 2.8KCOILS output, window length 21
[ ]jp_6qWJHdY.coilseq.lupas_282015-04-17 15:53 2.8KCOILS output, window length 28
[ ]jp_6qWJHdY.blast.gz2015-04-17 15:53 8.1KCompressed PSIBLAST output file
[ ]jp_6qWJHdY.full_MSA.fasta2015-04-17 15:53 7.3KFull MSA before JPred filters in FASTA
[TXT]jp_6qWJHdY.full_MSA.fasta.noGaps.html2015-04-17 15:53 16KFull MSA before JPred filters in FASTA
[TXT]jp_6qWJHdY.full_MSA.fasta.withGaps.html2015-04-17 15:53 18KFull MSA before JPred filters in FASTA
[ ]jp_6qWJHdY.hmm2015-04-17 15:53 12KHHMer2 profile of the alignment
[TXT]jp_6qWJHdY.html2015-04-17 15:53 11KHTML prediction and alignment data
[TXT]jp_6qWJHdY.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_6qWJHdY.fasta2015-04-17 15:50 79 Input query sequence in FASTA format
[TXT]jp_6qWJHdY.results.html2016-02-15 12:20 37KJPred results page
[TXT]LOG2015-04-17 15:53 4.7KJPred server log file
[TXT]jp_6qWJHdY.svg.html2015-04-17 15:53 29KJalview SVG summary of results
[ ]jp_6qWJHdY.jalview2015-04-17 15:53 2.2KJalview annotation file for alignment
[TXT]jp_6qWJHdY.results_jalview.html2016-02-24 17:18 13KJalview results options
[ ]jp_6qWJHdY.jnet2015-04-17 15:53 2.5KJnet secondary structure output
[TXT]d2hdza_.name2015-04-17 15:39 0 Job name flag file
[ ]jp_6qWJHdY.concise.pdf2015-04-17 15:53 14KPDF prediction and alignment data
[ ]jp_6qWJHdY.pssm2015-04-17 15:53 14KPSIBLAST PSSM for Jnet
[ ]jp_6qWJHdY.align2015-04-17 15:53 1.1KPSIBLAST alignment in FASTA format
[TXT]jp_6qWJHdY.profile2015-04-17 15:51 11KPSIBLAST profile from alignment
[ ]jp_6qWJHdY.concise2015-04-17 15:53 4.9KPrediction: coiled-coil, solvent, alignment
[ ]jp_6qWJHdY.concise.fasta2015-04-17 15:53 1.8KPrediction: coiled-coil, solvent, alignment
[ ]jp_6qWJHdY.concise.ps2015-04-17 15:53 234KPrediction: coiled-coil, solvent, alignment
[ ]jp_6qWJHdY.input2015-04-17 15:39 73 Raw input data for analysis
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[ ]jp_6qWJHdY.seq2015-04-17 15:39 79 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.