JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:53 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2hf1a1.name2015-04-17 18:44 0 Job name flag file
[ ]jp_MQSb4nX.align2015-04-17 20:52 73KPSIBLAST alignment in FASTA format
[TXT]jp_MQSb4nX.als2015-04-17 20:52 1.9KAlscript command file for PS/PDF output
[ ]jp_MQSb4nX.blast.gz2015-04-17 20:51 402KCompressed PSIBLAST output file
[TXT]jp_MQSb4nX.coils.csv2015-04-17 20:52 384 COILS output in CSV format
[ ]jp_MQSb4nX.coilseq.lupas_142015-04-17 20:52 2.5KCOILS output, window length 14
[ ]jp_MQSb4nX.coilseq.lupas_212015-04-17 20:52 2.5KCOILS output, window length 21
[ ]jp_MQSb4nX.coilseq.lupas_282015-04-17 20:52 2.5KCOILS output, window length 28
[ ]jp_MQSb4nX.concise2015-04-17 20:52 137KPrediction: coiled-coil, solvent, alignment
[ ]jp_MQSb4nX.concise.blc2015-04-17 20:52 73KBLC format prediction and alignment data
[ ]jp_MQSb4nX.concise.fasta2015-04-17 20:52 73KPrediction: coiled-coil, solvent, alignment
[ ]jp_MQSb4nX.concise.pdf2015-04-17 20:53 427KPDF prediction and alignment data
[ ]jp_MQSb4nX.concise.ps2015-04-17 20:52 7.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_MQSb4nX.fasta2015-04-17 20:47 72 Input query sequence in FASTA format
[ ]jp_MQSb4nX.full_MSA.fasta2015-04-17 20:51 769KFull MSA before JPred filters in FASTA
[TXT]jp_MQSb4nX.full_MSA.fasta.noGaps.html2015-04-17 20:53 323KFull MSA before JPred filters in FASTA
[TXT]jp_MQSb4nX.full_MSA.fasta.withGaps.html2015-04-17 20:53 2.4MFull MSA before JPred filters in FASTA
[ ]jp_MQSb4nX.hmm2015-04-17 20:52 11KHHMer2 profile of the alignment
[TXT]jp_MQSb4nX.html2015-04-17 20:52 260KHTML prediction and alignment data
[ ]jp_MQSb4nX.input2015-04-17 18:44 66 Raw input data for analysis
[ ]jp_MQSb4nX.jalview2015-04-17 20:52 2.0KJalview annotation file for alignment
[ ]jp_MQSb4nX.jnet2015-04-17 20:52 2.2KJnet secondary structure output
[TXT]jp_MQSb4nX.profile2015-04-17 20:50 9.8KPSIBLAST profile from alignment
[ ]jp_MQSb4nX.pssm2015-04-17 20:52 13KPSIBLAST PSSM for Jnet
[TXT]jp_MQSb4nX.results.html2016-02-15 12:20 34KJPred results page
[TXT]jp_MQSb4nX.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_MQSb4nX.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_MQSb4nX.seq2015-04-17 18:44 72 Sequence data file
[TXT]jp_MQSb4nX.simple.html2015-04-17 20:52 1.1KBrief HTML: sequence and prediction only
[TXT]jp_MQSb4nX.svg.html2015-04-17 20:53 26KJalview SVG summary of results
[ ]jp_MQSb4nX.tar.gz2015-04-17 20:53 1.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.