JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:54 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2hnua_.name2015-04-17 18:07 0 Job name flag file
[ ]jp_zO18QHe.align2015-04-17 19:53 9.4KPSIBLAST alignment in FASTA format
[TXT]jp_zO18QHe.als2015-04-17 19:53 2.0KAlscript command file for PS/PDF output
[ ]jp_zO18QHe.blast.gz2015-04-17 19:53 42KCompressed PSIBLAST output file
[TXT]jp_zO18QHe.coils.csv2015-04-17 19:53 528 COILS output in CSV format
[ ]jp_zO18QHe.coilseq.lupas_142015-04-17 19:53 3.5KCOILS output, window length 14
[ ]jp_zO18QHe.coilseq.lupas_212015-04-17 19:53 3.5KCOILS output, window length 21
[ ]jp_zO18QHe.coilseq.lupas_282015-04-17 19:53 3.5KCOILS output, window length 28
[ ]jp_zO18QHe.concise2015-04-17 19:53 21KPrediction: coiled-coil, solvent, alignment
[ ]jp_zO18QHe.concise.blc2015-04-17 19:53 10KBLC format prediction and alignment data
[ ]jp_zO18QHe.concise.fasta2015-04-17 19:53 10KPrediction: coiled-coil, solvent, alignment
[ ]jp_zO18QHe.concise.pdf2015-04-17 19:53 59KPDF prediction and alignment data
[ ]jp_zO18QHe.concise.ps2015-04-17 19:53 1.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_zO18QHe.fasta2015-04-17 19:47 97 Input query sequence in FASTA format
[ ]jp_zO18QHe.full_MSA.fasta2015-04-17 19:53 43KFull MSA before JPred filters in FASTA
[TXT]jp_zO18QHe.full_MSA.fasta.noGaps.html2015-04-17 19:53 49KFull MSA before JPred filters in FASTA
[TXT]jp_zO18QHe.full_MSA.fasta.withGaps.html2015-04-17 19:53 180KFull MSA before JPred filters in FASTA
[ ]jp_zO18QHe.hmm2015-04-17 19:53 16KHHMer2 profile of the alignment
[TXT]jp_zO18QHe.html2015-04-17 19:53 34KHTML prediction and alignment data
[ ]jp_zO18QHe.input2015-04-17 18:07 90 Raw input data for analysis
[ ]jp_zO18QHe.jalview2015-04-17 19:53 2.4KJalview annotation file for alignment
[ ]jp_zO18QHe.jnet2015-04-17 19:53 3.1KJnet secondary structure output
[TXT]jp_zO18QHe.profile2015-04-17 19:52 14KPSIBLAST profile from alignment
[ ]jp_zO18QHe.pssm2015-04-17 19:53 18KPSIBLAST PSSM for Jnet
[TXT]jp_zO18QHe.results.html2016-02-15 12:20 43KJPred results page
[TXT]jp_zO18QHe.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_zO18QHe.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_zO18QHe.seq2015-04-17 18:07 97 Sequence data file
[TXT]jp_zO18QHe.simple.html2015-04-17 19:53 1.1KBrief HTML: sequence and prediction only
[TXT]jp_zO18QHe.svg.html2015-04-17 19:54 35KJalview SVG summary of results
[ ]jp_zO18QHe.tar.gz2015-04-17 19:54 160KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.